Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3649

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3648: 12016 - K15448 TRM112, TRMT112 multifunctional methyltransferase subunit TRM112, at 252546 to 253342 12016 mRNA_3649: 12017 - HMMPfam-Protein of unknown function, DUF604-PF04646, at 253942 to 255854 12017 mRNA_3650: 12018 - Hypothetical Protein, at 256801 to 258115 12018

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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253,376 + 1.5
253,490 - -1.5
253,537 + -1.7
253,631 + -0.3
253,650 + 0.7
253,653 - 3.8
253,660 - -0.2
253,664 + -2.2
253,687 - -0.4
253,692 + 0.1
253,796 + 1.8
253,810 - -0.1
253,810 + 0.8
253,835 - 1.5
253,968 - 0.0
254,553 - 12017 mRNA_3649 0.32 2.8
255,440 + 12017 mRNA_3649 0.78 0.4
255,552 - 12017 mRNA_3649 0.84 3.2
255,556 - 12017 mRNA_3649 0.84 0.5
255,556 - 12017 mRNA_3649 0.84 -1.5
255,698 - 0.7
255,718 + 1.1
255,837 - -0.4
255,875 + -1.0
255,995 - -0.9
256,006 - 0.0
256,015 - 0.1
256,020 + 0.1
256,046 + 0.2
256,084 - -0.0
256,131 - -0.2
256,139 + 1.9
256,156 + -0.1
256,262 + -1.6
256,279 - -0.9
256,280 - 0.9
256,282 + 1.2
256,286 + 0.5
256,286 - 0.3
256,287 - -0.1
256,288 + 2.8
256,288 + 1.8
256,297 + 1.2
256,298 + -0.5
256,300 - 0.4
256,301 + 0.1
256,310 - -0.1
256,314 - -1.3
256,327 + 0.4
256,333 - 1.6
256,377 - 4.2
256,379 + 0.6
256,379 + -0.2
256,384 - 0.5
256,393 - 1.4
256,400 + 1.3
256,404 - 3.7
256,435 - -1.2
256,436 - 2.4
256,447 - -0.3
256,450 + -0.4
256,453 + 1.4
256,461 + 0.2
256,463 - 0.2
256,468 + 2.8
256,470 - 3.2
256,475 - 0.1
256,481 - 0.9
256,484 + 1.9
256,486 - 0.7
256,486 - 1.5
256,491 - -0.5
256,492 + -2.6
256,509 - 0.9
256,512 + -1.4
256,522 - 1.2
256,525 + 0.3
256,530 + -1.3
256,542 - 1.3
256,543 - 2.5
256,548 - 1.3
256,555 - 0.1
256,570 - -1.0
256,572 + 0.1
256,574 - -0.3
256,596 + 0.1
256,600 - 0.9
256,606 - 0.4
256,612 - 2.8
256,613 - -1.5
256,614 + -1.0
256,615 - 1.5
256,618 - 0.9
256,620 - 0.3
256,622 + 2.0
256,624 - -0.3
256,627 + -0.8
256,637 + 0.1
256,640 - -0.9
256,644 - -1.2
256,645 - 0.7
256,646 + 0.9
256,655 + 1.2
256,655 - -1.4
256,661 - 0.9
256,661 - -0.0
256,665 - 2.3
256,676 + -0.3
256,681 + -0.3
256,706 + 0.2
256,785 - -0.5
256,825 + 0.5
256,835 - 1.3