Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3647

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3646: 12014 - Hypothetical Protein, at 249601 to 250328 12014 mRNA_3647: 12015 - Hypothetical Protein, at 250784 to 251947 12015 mRNA_3648: 12016 - K15448 TRM112, TRMT112 multifunctional methyltransferase subunit TRM112, at 252546 to 253342 12016

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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249,786 - 12014 mRNA_3646 0.25 -0.8
249,790 - 12014 mRNA_3646 0.26 0.3
249,795 - 12014 mRNA_3646 0.27 -0.9
249,797 - 12014 mRNA_3646 0.27 -0.2
249,804 + 12014 mRNA_3646 0.28 2.0
249,806 + 12014 mRNA_3646 0.28 1.8
249,816 - 12014 mRNA_3646 0.30 0.0
249,822 - 12014 mRNA_3646 0.30 0.7
249,927 + 12014 mRNA_3646 0.45 -0.3
249,941 - 12014 mRNA_3646 0.47 -0.4
249,945 + 12014 mRNA_3646 0.47 0.1
249,946 + 12014 mRNA_3646 0.47 0.4
249,947 - 12014 mRNA_3646 0.48 0.6
249,953 - 12014 mRNA_3646 0.48 0.1
249,954 - 12014 mRNA_3646 0.48 1.4
249,955 + 12014 mRNA_3646 0.49 -0.2
249,963 + 12014 mRNA_3646 0.50 -1.2
249,966 - 12014 mRNA_3646 0.50 1.9
249,976 - 12014 mRNA_3646 0.52 0.4
249,982 + 12014 mRNA_3646 0.52 -1.8
250,079 - 12014 mRNA_3646 0.66 2.7
250,238 - 12014 mRNA_3646 0.88 0.8
250,246 - 12014 mRNA_3646 0.89 0.6
250,246 - 12014 mRNA_3646 0.89 -0.9
250,249 + 12014 mRNA_3646 0.89 0.2
250,250 - 12014 mRNA_3646 0.89 0.4
250,254 + 12014 mRNA_3646 0.90 2.0
250,254 - 12014 mRNA_3646 0.90 -0.7
250,254 + 12014 mRNA_3646 0.90 0.4
250,255 + 12014 mRNA_3646 0.90 0.5
250,259 - 0.4
250,262 - -0.3
250,263 + 1.3
250,263 + 0.4
250,269 + 1.0
250,298 - 1.1
250,322 + 0.4
250,330 - -0.1
250,346 - -0.4
250,358 + 0.2
250,455 - -1.0
250,464 - 0.9
250,468 + 2.5
250,738 - -0.2
250,758 + 0.4
250,765 + 1.7
251,206 + 12015 mRNA_3647 0.36 0.4
251,312 - 12015 mRNA_3647 0.45 0.3
251,344 + 12015 mRNA_3647 0.48 1.5
251,621 + 12015 mRNA_3647 0.72 -0.2
252,048 - 0.2
252,197 - 1.3
252,481 - -0.9
252,496 - 0.9
252,505 - 2.5