Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3644

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3644: 12012 - Hypothetical Protein, at 242655 to 243950 12012 mRNA_3645: 12013 - K14439 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, at 244941 to 247626 12013

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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241,820 - -0.3
241,822 + 1.6
241,836 + -0.9
241,965 + -1.2
241,967 + 1.7
241,991 + 1.1
241,995 + -0.2
242,098 - 0.5
242,115 - 2.0
242,122 + 2.0
242,123 - 1.7
242,132 - 2.5
242,143 + 0.6
242,144 + 1.3
242,146 - 0.7
242,259 + 0.5
242,302 + 1.3
242,306 + -1.4
242,409 + -0.1
242,524 - -0.5
242,669 - 0.3
242,725 - 1.2
242,726 + 0.3
242,911 + 12012 mRNA_3644 0.20 -0.1
243,065 - 12012 mRNA_3644 0.32 1.3
243,127 - 12012 mRNA_3644 0.36 3.5
243,160 - 12012 mRNA_3644 0.39 0.6
243,462 + 12012 mRNA_3644 0.62 1.4
243,573 + 12012 mRNA_3644 0.71 0.6
244,103 + 2.3
244,141 - 1.3
244,152 + 0.5
244,171 - 1.2
244,285 + 0.8
244,311 + 2.0
244,327 + 2.9
244,411 + 0.7
244,423 + 1.4
244,435 - -0.3
244,443 + 3.9
244,451 + -0.6
244,576 - 1.4
244,580 + -1.0
244,587 + -0.2
244,591 - 1.0
244,593 - -1.0
244,697 - -0.1
244,722 + -1.2
244,731 + -0.2
244,734 - 1.6
244,742 + -0.3
244,753 + 1.2
244,759 + 2.0
244,763 - 0.0
244,780 + -0.6
244,784 - -0.2
244,785 + 0.8
244,886 + 0.7
244,898 - 0.4
244,949 + 0.2