Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3638

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3637: 12005 - KOG0730 AAA+-type ATPase, at 218829 to 220926 12005 mRNA_3638: 12006 - KOG1721 FOG Zn-finger, at 221739 to 224481 12006

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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220,753 - 2.0
220,905 + 1.2
221,175 + 0.7
221,604 - -1.6
221,609 + -0.7
221,625 + -0.6
221,629 + -0.6
221,631 + 0.0
221,639 + 0.2
221,639 + -0.7
221,648 + -0.9
221,652 + 2.6
221,803 + -0.1
221,950 + 2.6
222,237 - 12006 mRNA_3638 0.18 0.5
222,251 - 12006 mRNA_3638 0.19 -2.0
222,333 + 12006 mRNA_3638 0.22 1.3
222,530 - 12006 mRNA_3638 0.29 0.6
222,537 - 12006 mRNA_3638 0.29 0.6
222,698 + 12006 mRNA_3638 0.35 0.3
222,703 - 12006 mRNA_3638 0.35 0.7
222,838 - 12006 mRNA_3638 0.40 0.3
222,943 - 12006 mRNA_3638 0.44 0.6
223,436 + 12006 mRNA_3638 0.62 -2.2
223,456 + 12006 mRNA_3638 0.63 0.6
223,992 + 12006 mRNA_3638 0.82 -0.5
224,424 - 1.3
224,625 - 1.0
224,738 - 0.6
224,900 + 0.8
224,936 + 1.9
225,054 + 0.1
225,184 + -0.1
225,199 + -0.9
225,199 + 1.9
225,341 - -1.4
225,353 - 0.7
225,353 - 0.3
225,358 - -0.1
225,468 - 0.3