Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3633

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3633: 12001 - KOG1074 Transcriptional repressor SALM, at 211047 to 213295 12001 mRNA_3634: 12002 - KOG2456 Aldehyde dehydrogenase, at 213705 to 215567 12002

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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210,092 - 1.3
210,261 + -0.5
210,951 - -0.6
211,119 - 0.2
211,809 - 12001 mRNA_3633 0.34 2.3
211,831 + 12001 mRNA_3633 0.35 2.5
212,475 + 12001 mRNA_3633 0.63 1.2
212,502 + 12001 mRNA_3633 0.65 0.5
212,740 + 12001 mRNA_3633 0.75 0.0
212,828 + 12001 mRNA_3633 0.79 0.8
213,027 - 12001 mRNA_3633 0.88 0.1
213,304 - -0.4
213,430 - 2.4
213,771 + 1.4
214,018 - 12002 mRNA_3634 0.17 0.2
214,027 + 12002 mRNA_3634 0.17 1.1
214,047 + 12002 mRNA_3634 0.18 -0.8
214,070 + 12002 mRNA_3634 0.20 1.0
214,266 + 12002 mRNA_3634 0.30 2.1