Strain Fitness in Rhodosporidium toruloides IFO0880

Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3621

Experiments: YPD

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

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Per-strain Table

Position	Strand	Gene	Sysname	Fraction	YPD
					remove
182,441	-	11988	mRNA_3620	0.54	-0.9
182,732	-	11988	mRNA_3620	0.77	-0.2
182,749	+	11988	mRNA_3620	0.78	0.4
183,188	-				1.6
184,784	-	11989	mRNA_3621	0.69	-1.2
184,787	-	11989	mRNA_3621	0.69	0.2
185,231	-	11989	mRNA_3621	0.89	0.4
185,249	+	11989	mRNA_3621	0.90	2.3
185,400	+				-1.3
185,410	+				-2.6
185,523	-				1.3
185,533	-				-0.8
185,533	-				0.5
185,548	-				-0.8
185,548	-				-0.2
185,549	-				-0.7
185,553	+				0.8
185,560	+				-0.7
185,564	+				0.3
185,565	-				-0.7
185,567	-				2.2
185,568	+				-0.5
185,570	-				0.9
185,578	+				2.3
185,578	+				0.7
185,593	-				-0.6
185,593	-				-0.4
185,593	-				0.3
185,594	+				-0.6
185,596	+				-1.1
185,601	+				-1.8
185,649	-				1.7
185,661	-				-0.0
185,661	-				1.1
185,662	+				0.2
185,662	+				-0.1
185,666	+				0.5
185,673	-				-0.2
185,677	-				0.0
185,679	+				-0.9
185,696	+				0.2
185,704	+				0.2
185,712	-				0.2
185,713	+				0.8
185,727	+				1.8
185,744	-				1.1
185,763	+				1.8
185,786	-				0.1
185,816	+				-0.9
185,830	+				1.7
185,833	-				1.9
185,852	-				0.7
185,855	+				0.3
185,877	+				2.7
185,885	+				0.2
185,888	+				1.2
185,888	+				0.4
185,912	-				2.1
185,920	+				0.6
185,948	+				1.3
185,963	-				1.2
185,978	-				1.8
185,979	+				2.2
185,989	+				0.4
186,026	+				-1.3
186,029	+				-1.1
186,122	+				-0.9
186,164	-				-0.3
186,196	+				-0.7
186,301	-	11990	mRNA_3622	0.12	-0.4
186,328	-	11990	mRNA_3622	0.13	-0.6
186,349	-	11990	mRNA_3622	0.14	2.4
186,378	-	11990	mRNA_3622	0.15	4.3