Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3559

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3558: 11926 - K14808 DDX54, DBP10 ATP-dependent RNA helicase DDX54/DBP10, at 44062 to 47314 11926 mRNA_3559: 11927 - K18622 ADD adducin, at 47596 to 49033 11927 mRNA_3560: 11928 - K06101 ASH1L histone-lysine N-methyltransferase ASH1L, at 49471 to 51932 11928

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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47,522 - 0.1
47,525 + -1.0
47,529 - -0.3
47,530 - -0.5
47,532 + 0.5
47,533 - 0.1
47,536 - 0.6
47,536 - 0.0
47,537 + 0.4
47,537 + 0.3
47,538 - 1.5
47,538 + -0.2
47,539 + 0.4
47,547 - -0.1
47,553 + 1.7
47,563 - 2.6
47,709 + -0.8
47,713 - 0.9
47,906 + 11927 mRNA_3559 0.22 2.2
48,016 - 11927 mRNA_3559 0.29 0.7
48,283 + 11927 mRNA_3559 0.48 1.4
48,915 + -0.7
49,465 + 1.0
49,773 + 11928 mRNA_3560 0.12 0.1
49,785 + 11928 mRNA_3560 0.13 0.4
49,901 + 11928 mRNA_3560 0.17 0.1