Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3537

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3537: 11905 - Hypothetical Protein, at 102 to 917 11905

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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2 + -1.9
2 + -1.5
2 + -2.2
2 + -0.9
2 + 0.2
2 + 0.6
2 + 2.5
14 + 0.0
26 + -0.5
36 + 1.7
39 + -1.8
42 - 0.7
50 + 0.5
50 + 0.6
50 + 1.3
53 - 1.8
57 + -0.2
59 - 2.0
103 + 0.2
104 + -0.8
112 + -0.0
117 - -1.5
120 - 0.0
140 - -0.3
141 + -1.3
146 + 2.2
150 + 1.2
199 - 11905 mRNA_3537 0.12 1.5
200 + 11905 mRNA_3537 0.12 0.1
200 - 11905 mRNA_3537 0.12 -0.4
200 - 11905 mRNA_3537 0.12 1.6
200 - 11905 mRNA_3537 0.12 0.0
201 - 11905 mRNA_3537 0.12 0.5
207 + 11905 mRNA_3537 0.13 2.6
207 + 11905 mRNA_3537 0.13 -1.0
207 + 11905 mRNA_3537 0.13 1.0
209 + 11905 mRNA_3537 0.13 1.0
210 + 11905 mRNA_3537 0.13 0.5
213 + 11905 mRNA_3537 0.14 -0.5
213 + 11905 mRNA_3537 0.14 1.0
214 + 11905 mRNA_3537 0.14 -0.1
214 + 11905 mRNA_3537 0.14 0.5
218 + 11905 mRNA_3537 0.14 2.2
221 + 11905 mRNA_3537 0.15 -0.0
222 + 11905 mRNA_3537 0.15 0.4
222 + 11905 mRNA_3537 0.15 -1.0
222 + 11905 mRNA_3537 0.15 -0.2
223 - 11905 mRNA_3537 0.15 0.8
225 - 11905 mRNA_3537 0.15 -0.9
227 - 11905 mRNA_3537 0.15 -0.5
227 + 11905 mRNA_3537 0.15 1.4
230 + 11905 mRNA_3537 0.16 0.4
230 + 11905 mRNA_3537 0.16 0.9
246 - 11905 mRNA_3537 0.18 -0.6
246 - 11905 mRNA_3537 0.18 2.4
251 + 11905 mRNA_3537 0.18 1.3
252 + 11905 mRNA_3537 0.18 -0.1
260 + 11905 mRNA_3537 0.19 1.2
262 + 11905 mRNA_3537 0.20 -0.6
265 - 11905 mRNA_3537 0.20 0.4
272 - 11905 mRNA_3537 0.21 0.8
274 + 11905 mRNA_3537 0.21 0.4
325 - 11905 mRNA_3537 0.27 0.9
326 - 11905 mRNA_3537 0.27 -0.7
341 + 11905 mRNA_3537 0.29 -0.7
359 + 11905 mRNA_3537 0.31 1.8
362 + 11905 mRNA_3537 0.32 0.6
367 - 11905 mRNA_3537 0.32 2.7
368 + 11905 mRNA_3537 0.33 0.1
368 + 11905 mRNA_3537 0.33 -0.3
368 + 11905 mRNA_3537 0.33 -0.5
373 + 11905 mRNA_3537 0.33 1.9
373 - 11905 mRNA_3537 0.33 -0.6
373 - 11905 mRNA_3537 0.33 0.4
379 + 11905 mRNA_3537 0.34 0.3
380 + 11905 mRNA_3537 0.34 1.8
417 + 11905 mRNA_3537 0.39 -0.1
452 + 11905 mRNA_3537 0.43 0.3
472 + 11905 mRNA_3537 0.45 1.5
484 + 11905 mRNA_3537 0.47 0.0
489 - 11905 mRNA_3537 0.47 0.4
503 - 11905 mRNA_3537 0.49 -1.3
511 + 11905 mRNA_3537 0.50 0.5
518 + 11905 mRNA_3537 0.51 2.5
523 + 11905 mRNA_3537 0.52 0.4
533 + 11905 mRNA_3537 0.53 1.4
539 + 11905 mRNA_3537 0.54 1.3
550 + 11905 mRNA_3537 0.55 0.2
579 + 11905 mRNA_3537 0.58 -0.2
638 - 11905 mRNA_3537 0.66 -0.7
640 - 11905 mRNA_3537 0.66 1.9
657 + 11905 mRNA_3537 0.68 0.5
762 - 11905 mRNA_3537 0.81 -1.7
768 + 11905 mRNA_3537 0.82 -0.6
791 - 11905 mRNA_3537 0.84 -0.2
801 + 11905 mRNA_3537 0.86 -0.3
804 + 11905 mRNA_3537 0.86 -0.1
822 + 11905 mRNA_3537 0.88 -2.4
827 + 11905 mRNA_3537 0.89 -0.0
842 + -0.2
842 + -0.6
845 - 0.8
962 - 0.4
990 + 3.5
1,074 + 1.7
1,080 - 0.1
1,107 + 0.4
1,110 - 1.8
1,123 + 0.6
1,143 + 0.2
1,256 - 0.2
1,278 + -0.0
1,336 + 0.6
1,371 - 1.7
1,404 - -0.5
1,429 + -0.4
1,450 + 1.8
1,528 + 1.1
1,550 + 0.9
1,647 - -0.4
1,653 + 1.1
1,661 - 0.6
1,663 + -0.4
1,719 + -1.5
1,720 + 0.3
1,760 + 0.2
1,814 - 0.1
1,902 - 0.2