Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3535

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3534: 11902 - Hypothetical Protein, at 330976 to 331488 11902 mRNA_3535: 11903 - HMMPfam-Protein of unknown function (DUF2419)-PF10343, at 331726 to 332711 11903 mRNA_3536: 11904 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 333294 to 333991 11904

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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331,078 + 11902 mRNA_3534 0.20 1.1
331,081 - 11902 mRNA_3534 0.20 -0.7
331,234 - 11902 mRNA_3534 0.50 -0.6
331,236 + 11902 mRNA_3534 0.51 0.3
331,379 + 11902 mRNA_3534 0.79 0.8
331,487 - -1.5
331,509 - 0.1
331,514 + 1.2
331,520 - -0.1
331,538 + 0.7
331,651 - 0.8
332,134 - 11903 mRNA_3535 0.41 -0.7
332,759 - 0.9
332,845 - 0.6
332,881 - 1.0
332,963 + -0.3
332,977 - 0.8
333,135 + -0.3
333,427 - 11904 mRNA_3536 0.19 -1.5
333,569 + 11904 mRNA_3536 0.39 1.5
333,580 - 11904 mRNA_3536 0.41 0.5
333,683 - 11904 mRNA_3536 0.56 1.4
333,706 - 11904 mRNA_3536 0.59 -2.0