Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3527

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3526: 11894 - K06666 TUP1 glucose repression regulatory protein TUP1, at 311726 to 314497 11894 mRNA_3527: 11895 - K08658 RCE1, FACE2 prenyl protein peptidase, at 315026 to 316520 11895 mRNA_3528: 11896 - Hypothetical Protein, at 316787 to 317613 11896

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
314,270 - 0.8
314,428 - 2.1
314,429 + -0.6
314,446 - -0.0
314,555 - 0.9
314,564 + 0.3
314,567 - -0.3
314,583 - 0.4
314,590 - 1.7
314,591 + 1.2
314,607 + 1.0
314,684 - 1.3
314,719 - 0.1
314,723 - 2.4
314,724 - 0.1
314,726 - -0.8
314,740 + 1.1
314,745 - -1.3
314,756 + 1.6
314,860 + -0.4
314,863 - 0.5
314,868 - 0.9
314,871 - 1.7
314,877 + -0.7
314,883 + 2.2
314,887 - 2.5
314,894 + 0.3
314,896 + 0.6
314,898 + 0.0
314,920 - 2.1
314,964 - 0.8
314,967 - 1.0
314,967 + -0.9
314,971 - -0.5
314,972 + 2.5
314,995 + -0.3
315,101 - -0.5
315,119 - 0.1
315,121 - 3.0
315,125 - -0.0
315,161 + -0.6
315,294 - 11895 mRNA_3527 0.18 0.5
315,443 + 11895 mRNA_3527 0.28 0.8
315,748 - 11895 mRNA_3527 0.48 0.6
315,826 + 11895 mRNA_3527 0.54 -0.3
316,395 + 0.7
316,409 - 3.3
316,653 + 0.5
316,683 + -0.6
316,690 + 1.4
316,694 + 1.2
316,706 + 0.6
316,803 + -0.0
316,817 - 0.3
316,841 + -0.6
316,876 + 11896 mRNA_3528 0.11 -0.6
316,896 + 11896 mRNA_3528 0.13 0.7
316,916 - 11896 mRNA_3528 0.16 -2.6
316,996 + 11896 mRNA_3528 0.25 0.0
317,420 - 11896 mRNA_3528 0.77 0.7