Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3445

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3444: 11812 - Hypothetical Protein, at 118476 to 119519 11812 mRNA_3445: 11813 - HMMPfam-BRO1-like domain-PF03097,ProSiteProfiles-BRO1 domain profile.-PS51180,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SMART-BRO1-like domain-SM01041, at 120363 to 121884 11813 mRNA_3446: 11814 - K07393 ECM4 putative glutathione S-transferase, at 122538 to 123846 11814

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
119,578 - -0.3
119,579 + -1.2
119,601 + 0.5
119,736 + 0.4
119,904 - -0.0
120,034 - -0.5
120,892 + 11813 mRNA_3445 0.35 0.1
120,934 - 11813 mRNA_3445 0.38 -1.5
121,217 - 11813 mRNA_3445 0.56 2.4
121,632 + 11813 mRNA_3445 0.83 0.7
121,634 - 11813 mRNA_3445 0.84 -0.4
121,636 - 11813 mRNA_3445 0.84 0.4
122,049 - -1.7
122,071 - 0.9
122,231 - 1.0
122,238 + -0.7
122,238 - -0.4
122,238 - -0.1
122,239 + -1.9
122,240 + 0.0
122,245 + 0.7
122,381 - 1.1
122,514 + 0.5
122,526 + -0.5
122,669 - 11814 mRNA_3446 0.10 -0.0
122,861 - 11814 mRNA_3446 0.25 0.7