Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3427

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3426: 11794 - K08498 STX6 syntaxin 6, at 69287 to 70405 11794 mRNA_3427: 11795 - HMMPfam-Domain of unknown function (DUF1996)-PF09362, at 70674 to 72222 11795 mRNA_3428: 11796 - Hypothetical Protein, at 72925 to 76768 11796

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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69,728 + 11794 mRNA_3426 0.39 2.4
69,813 - 11794 mRNA_3426 0.47 0.3
69,820 + 11794 mRNA_3426 0.48 2.6
69,867 + 11794 mRNA_3426 0.52 0.1
69,896 - 11794 mRNA_3426 0.54 2.1
69,896 - 11794 mRNA_3426 0.54 0.7
69,909 + 11794 mRNA_3426 0.56 1.1
70,282 - 11794 mRNA_3426 0.89 -0.5
70,459 - 0.4
70,576 + -1.7
70,854 - 11795 mRNA_3427 0.12 0.5
70,870 + 11795 mRNA_3427 0.13 -0.2
70,911 - 11795 mRNA_3427 0.15 1.1
71,324 + 11795 mRNA_3427 0.42 -1.2
71,329 - 11795 mRNA_3427 0.42 0.1
71,624 + 11795 mRNA_3427 0.61 0.8
71,875 + 11795 mRNA_3427 0.78 1.5
71,908 + 11795 mRNA_3427 0.80 2.9
72,322 + 0.1
72,858 - 0.2
72,887 + 0.7
73,047 - 0.3
73,075 + -0.8
73,160 + 0.3