Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3425

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3424: 11792 - Hypothetical Protein, at 64972 to 67736 11792 mRNA_3425: 11793 - K00789 metK S-adenosylmethionine synthetase, at 67905 to 69207 11793 mRNA_3426: 11794 - K08498 STX6 syntaxin 6, at 69287 to 70405 11794

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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67,038 - 11792 mRNA_3424 0.75 0.4
67,090 - 11792 mRNA_3424 0.77 1.6
67,372 - 11792 mRNA_3424 0.87 0.3
67,477 - 0.3
67,491 - -1.0
67,504 + 0.3
67,663 + 2.9
67,927 - -0.5
68,074 + 11793 mRNA_3425 0.13 -0.3
68,118 + 11793 mRNA_3425 0.16 1.1
68,236 - 11793 mRNA_3425 0.25 0.4
68,610 + 11793 mRNA_3425 0.54 1.7
68,785 + 11793 mRNA_3425 0.68 0.5
68,918 + 11793 mRNA_3425 0.78 -0.2
68,932 + 11793 mRNA_3425 0.79 0.7
68,942 - 11793 mRNA_3425 0.80 -0.8
68,969 - 11793 mRNA_3425 0.82 3.2
69,111 + 0.9
69,117 + 0.7
69,130 - -1.1
69,134 + 0.5
69,153 + 0.5
69,254 + 1.4
69,257 + 1.2
69,423 - 11794 mRNA_3426 0.12 0.0
69,569 - 11794 mRNA_3426 0.25 1.4
69,581 - 11794 mRNA_3426 0.26 0.0
69,728 + 11794 mRNA_3426 0.39 2.4
69,813 - 11794 mRNA_3426 0.47 0.3
69,820 + 11794 mRNA_3426 0.48 2.6
69,867 + 11794 mRNA_3426 0.52 0.1
69,896 - 11794 mRNA_3426 0.54 2.1
69,896 - 11794 mRNA_3426 0.54 0.7
69,909 + 11794 mRNA_3426 0.56 1.1