Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3410

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3409: 11777 - K05658 ABCB1, CD243 ATP-binding cassette, subfamily B (MDR/TAP), member 1, at 20794 to 26649 11777 mRNA_3410: 11778 - BLAST allergen [Malassezia sympodialis ATCC 42132], at 27190 to 28187 11778

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
26,269 + 3.1
26,289 + 0.3
26,293 + 0.6
26,306 + -1.0
26,435 - 0.8
26,460 + 0.9
26,543 + 0.7
26,559 - -1.1
26,572 + 0.3
26,589 - -0.0
26,590 + 0.5
26,596 + -0.2
26,602 + -0.3
26,621 - -0.4
26,640 - -0.6
26,645 + 2.8
26,647 - -0.1
26,654 + -0.3
26,654 - -0.1
26,666 - 2.3
26,915 + 1.1
26,941 - -0.0
26,942 - 1.1
26,947 + -0.5
26,957 + 0.2
27,048 + -0.3
27,130 + 0.9
27,371 + 11778 mRNA_3410 0.18 0.4
27,378 + 11778 mRNA_3410 0.19 -0.9
27,394 - 11778 mRNA_3410 0.20 0.4
27,403 + 11778 mRNA_3410 0.21 1.0
27,518 - 11778 mRNA_3410 0.33 0.1
27,574 - 11778 mRNA_3410 0.38 -1.2
28,109 + -0.4
28,416 + 0.1
28,491 - -0.4
28,493 + -0.3
28,718 + 0.6
28,730 + 2.5
28,738 + -0.0
28,753 - 0.1
28,771 + -0.8
28,771 + 2.0
28,786 - 4.0
28,787 + 0.4
28,789 + 0.4
28,798 + 1.6
28,813 - 1.1
28,832 + 0.7