Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3379

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3379: 11747 - Hypothetical Protein, at 537005 to 537944 11747 mRNA_3380: 11748 - KOG1650 Predicted K+/H+-antiporter, at 538274 to 541877 11748

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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536,061 + 1.3
536,183 - 1.1
536,186 - -1.4
536,194 - 1.9
536,195 - -0.1
536,349 - -1.9
536,504 - -0.9
536,506 + -0.7
536,535 - -1.6
536,536 + 2.3
536,613 - -0.5
536,815 + 1.9
536,819 + -0.3
536,950 - -0.3
536,975 + 0.8
536,999 + -1.3
537,072 - 1.9
537,072 - 0.5
537,078 + -0.2
537,078 + -0.4
537,263 - 11747 mRNA_3379 0.27 -0.0
537,282 + 11747 mRNA_3379 0.29 -1.2
537,427 + 11747 mRNA_3379 0.45 0.3
537,427 + 11747 mRNA_3379 0.45 -0.7
537,427 + 11747 mRNA_3379 0.45 2.0
537,433 + 11747 mRNA_3379 0.46 -0.1
537,522 - 11747 mRNA_3379 0.55 0.2
537,557 - 11747 mRNA_3379 0.59 -0.8
537,614 + 11747 mRNA_3379 0.65 0.0
537,844 - 11747 mRNA_3379 0.89 1.6
537,850 + 11747 mRNA_3379 0.90 -0.2
537,960 + -0.2
538,116 - 2.7
538,127 + 0.1
538,240 + -0.8
538,441 - 1.3
538,573 - 1.6
538,704 + 11748 mRNA_3380 0.12 1.0
538,706 + 11748 mRNA_3380 0.12 -0.1
538,715 + 11748 mRNA_3380 0.12 1.0
538,726 - 11748 mRNA_3380 0.13 -0.5
538,835 + 11748 mRNA_3380 0.16 0.1