Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3371

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3370: 11738 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 513932 to 515418 11738 mRNA_3371: 11739 - K13806 DAGL sn1-specific diacylglycerol lipase, at 516330 to 521387 11739 mRNA_3372: 11740 - K15103 UCP2_3, SLC25A8_9 solute carrier family 25 (mitochondrial uncoupling protein), member 8/9, at 522269 to 523428 11740

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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515,473 + 1.4
515,483 + 0.3
515,485 + -1.3
515,505 + 3.0
515,526 + -0.1
515,583 - -0.5
515,593 + -0.5
515,611 - 1.1
515,638 - 0.9
515,639 - 0.9
515,639 - -1.0
515,642 + -2.1
515,642 - 1.4
515,645 + -0.7
515,647 + 0.1
515,648 + 0.5
515,648 + -0.0
515,648 + 0.6
515,652 - 1.5
515,656 - 0.8
515,658 + 0.7
515,660 + 2.4
515,667 + 0.1
515,669 + 1.6
515,674 - 0.1
515,677 - -0.6
515,677 + 0.5
515,683 + 0.8
515,690 + -1.0
515,710 + 2.4
515,729 - 0.8
515,772 - -0.0
515,875 + -0.5
515,881 - 0.4
515,881 - -0.7
515,881 + 0.4
515,881 - -0.5
515,881 - 1.6
515,882 + 1.6
515,882 - 0.7
515,896 - 0.8
515,901 + -1.8
515,902 + -0.1
515,902 + 2.0
515,905 + -0.1
515,908 - 0.5
515,914 - 0.5
515,914 + 0.7
515,914 - -0.3
515,919 + -1.7
515,920 - 0.8
515,926 + -0.3
515,935 - 0.9
515,940 + 2.7
515,941 - 1.0
515,947 - -0.6
516,164 - -0.6
516,356 - 2.6
516,369 - 0.0
516,661 - -0.6
516,901 - 11739 mRNA_3371 0.11 0.7
517,256 + 11739 mRNA_3371 0.18 -0.1
517,382 + 11739 mRNA_3371 0.21 0.5
517,388 + 11739 mRNA_3371 0.21 -1.2
517,606 - 11739 mRNA_3371 0.25 0.3
517,821 + 11739 mRNA_3371 0.29 -1.4
517,833 + 11739 mRNA_3371 0.30 -0.3
517,950 - 11739 mRNA_3371 0.32 -1.9
517,962 + 11739 mRNA_3371 0.32 0.8
517,962 + 11739 mRNA_3371 0.32 0.3
517,966 + 11739 mRNA_3371 0.32 -1.4
518,245 - 11739 mRNA_3371 0.38 -1.3
518,271 + 11739 mRNA_3371 0.38 0.6
518,320 - 11739 mRNA_3371 0.39 -0.0
518,965 + 11739 mRNA_3371 0.52 -0.9
519,007 + 11739 mRNA_3371 0.53 0.4
519,188 + 11739 mRNA_3371 0.57 1.6
519,286 - 11739 mRNA_3371 0.58 0.2
519,372 + 11739 mRNA_3371 0.60 2.2
519,375 - 11739 mRNA_3371 0.60 0.6
519,699 - 11739 mRNA_3371 0.67 1.2
519,811 - 11739 mRNA_3371 0.69 -0.9
519,817 - 11739 mRNA_3371 0.69 0.6
519,969 - 11739 mRNA_3371 0.72 -0.2
520,022 - 11739 mRNA_3371 0.73 -0.3
520,043 + 11739 mRNA_3371 0.73 0.1
520,222 - 11739 mRNA_3371 0.77 -0.2
520,461 - 11739 mRNA_3371 0.82 -0.8
520,473 - 11739 mRNA_3371 0.82 1.0
520,563 + 11739 mRNA_3371 0.84 0.5
520,585 + 11739 mRNA_3371 0.84 0.2
520,615 - 11739 mRNA_3371 0.85 0.2
520,712 + 11739 mRNA_3371 0.87 -0.1
520,806 + 11739 mRNA_3371 0.88 0.1
520,823 - 11739 mRNA_3371 0.89 0.9
520,849 + 11739 mRNA_3371 0.89 -1.8
520,872 - 11739 mRNA_3371 0.90 -0.2
520,945 - -0.9
520,957 + 1.0
520,959 + 0.3
520,977 + -0.9
520,978 + 2.7
521,002 + 3.2
521,081 - 0.4
521,085 + 1.0
521,108 + -0.2
521,147 + 1.0
521,154 + -0.4
521,156 + -1.6
521,209 + 0.7
521,227 + 2.0
521,259 - 0.1
521,291 - 0.1
521,298 + 0.1
521,422 - 0.2
521,540 - -0.4
521,560 + -0.6
521,562 + 0.9
521,569 - -2.2
521,574 + 0.4
521,579 - -1.1
521,583 + 1.6
521,588 - -0.5
521,603 + -1.1
521,607 - 1.3
521,610 + 0.2
521,610 + 0.3
521,631 - 2.6
521,631 + 0.6
521,633 - 0.5
521,736 + 0.5
521,742 + -1.5
521,758 - -0.4
521,905 - -2.4
522,188 + 0.4
522,235 - -0.0