Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3328

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3327: 11695 - HMMPfam-BAG domain-PF02179,SUPERFAMILY--SSF63491, at 402652 to 404277 11695 mRNA_3328: 11696 - BLAST YALIA101S10e03422g1_1 [Yarrowia lipolytica], at 404411 to 405058 11696 mRNA_3329: 11697 - Hypothetical Protein, at 405409 to 406722 11697

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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403,611 + 11695 mRNA_3327 0.59 -1.4
404,042 - 11695 mRNA_3327 0.85 0.3
404,165 + -0.1
404,188 - 0.1
404,220 + 1.5
404,353 - 2.5
404,494 + 11696 mRNA_3328 0.13 0.5
404,498 + 11696 mRNA_3328 0.13 -1.1
405,367 + 0.4
405,503 - 0.2
405,529 + 0.8
405,530 + 0.3
405,956 + 11697 mRNA_3329 0.42 0.5