Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3301

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3300: 11668 - HMMPfam-Amidohydrolase-PF13147,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 335794 to 339454 11668 mRNA_3301: 11669 - K08197 ARN MFS transporter, SIT family, siderophore-iron-H+ symporter, at 339708 to 341858 11669

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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338,744 + 11668 mRNA_3300 0.81 -1.5
338,907 + 11668 mRNA_3300 0.85 0.1
339,030 - 11668 mRNA_3300 0.88 2.3
339,037 + 11668 mRNA_3300 0.89 3.2
339,178 - 0.1
339,189 - -0.7
339,204 + 0.7
339,208 - -0.4
339,215 + 0.5
339,331 + 0.6
339,338 + -0.4
339,350 + -0.5
339,362 + 1.4
339,416 + -0.1
339,484 - 0.2
339,513 + -1.3
339,521 - -0.2
339,533 + 1.9
339,539 - -0.1
339,550 + -0.6
339,554 + 1.9
339,557 + 0.8
339,648 + 0.6
339,649 + -0.3
339,659 - 0.3
339,670 - -0.8
339,676 + 2.2
339,872 + 0.2
339,891 - -0.1
339,909 + 0.1
339,927 + 11669 mRNA_3301 0.10 -0.7
339,956 - 11669 mRNA_3301 0.12 -0.1
339,971 - 11669 mRNA_3301 0.12 -0.3
340,046 - 11669 mRNA_3301 0.16 1.8
340,096 + 11669 mRNA_3301 0.18 0.4
340,215 - 11669 mRNA_3301 0.24 -1.5
340,350 + 11669 mRNA_3301 0.30 0.1
340,490 - 11669 mRNA_3301 0.36 -0.2
340,724 + 11669 mRNA_3301 0.47 -0.4
340,859 - 11669 mRNA_3301 0.54 -0.5
340,947 + 11669 mRNA_3301 0.58 0.5
340,958 + 11669 mRNA_3301 0.58 0.5
340,985 + 11669 mRNA_3301 0.59 -0.5
341,001 + 11669 mRNA_3301 0.60 1.5
341,029 - 11669 mRNA_3301 0.61 -2.0
341,032 + 11669 mRNA_3301 0.62 0.1
341,114 - 11669 mRNA_3301 0.65 0.7
341,136 - 11669 mRNA_3301 0.66 -2.3
341,419 + 11669 mRNA_3301 0.80 1.5
341,462 + 11669 mRNA_3301 0.82 0.5
341,701 + -0.7
341,705 + -0.5
341,820 - 0.6
341,851 - 1.4
341,853 + 1.4
341,880 - 0.5
341,898 - -0.1
341,915 - -1.0
342,026 + -0.3
342,032 + 0.9
342,052 + 0.2
342,059 - -0.8
342,059 - -0.3
342,060 + 0.1
342,064 + 0.0
342,066 + 0.3
342,068 - 0.2
342,069 - -0.2
342,071 + 2.3
342,074 - 0.3
342,074 - -0.3
342,077 - -0.3
342,081 - -0.0
342,089 + 0.6
342,095 + 0.4
342,099 + 2.4
342,101 - -0.9
342,108 + 0.5
342,116 - -0.7
342,117 - -1.6
342,149 - 3.0
342,157 + -0.8
342,165 + 0.4
342,166 + -0.6
342,176 - -0.1
342,179 - 0.1
342,193 - 0.1
342,201 + 0.7
342,205 + 0.7
342,206 + -0.9
342,210 - -1.5
342,215 + -0.3
342,218 - -1.2
342,219 + -1.2
342,231 + 1.7
342,232 + -0.4
342,268 + 0.0
342,271 + 0.8
342,291 - 0.2
342,310 + -0.2
342,310 + 0.2
342,312 + 2.0
342,328 + -1.0
342,336 - -0.5
342,340 - 1.3
342,384 + 0.7
342,414 + 1.4
342,421 - -0.3
342,423 - -0.2
342,440 - -1.7
342,446 - 0.2
342,463 - -0.0
342,563 + 2.2
342,588 - 0.7
342,704 - -0.2
342,713 + 0.8
342,768 + -1.5