Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3285

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3284: 11652 - BLAST something about silencing, SAS, complex subunit 4 [Rh..., at 291181 to 293324 11652 mRNA_3285: 11653 - KOG2069 Golgi transport complex subunit, at 293945 to 296560 11653 mRNA_3286: 11654 - Hypothetical Protein, at 297200 to 297720 11654

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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293,408 + -0.5
293,444 + -0.0
293,557 - -0.1
293,590 - 0.7
293,594 + 0.6
293,706 - 1.8
293,822 - 1.0
293,834 - 0.1
294,135 - -1.2
295,466 + 11653 mRNA_3285 0.58 2.9
295,474 - 11653 mRNA_3285 0.58 0.5
295,730 + 11653 mRNA_3285 0.68 1.0
296,036 - 11653 mRNA_3285 0.80 1.3
296,641 - -0.3
296,653 + -0.2
296,671 + 2.2
296,771 + 2.9
297,134 - -0.1
297,394 + 11654 mRNA_3286 0.37 -0.5
297,528 - 11654 mRNA_3286 0.63 0.0