Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3247

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3246: 11614 - Hypothetical Protein, at 205429 to 207188 11614 mRNA_3247: 11615 - Hypothetical Protein, at 207586 to 209247 11615 mRNA_3248: 11616 - Hypothetical Protein, at 210155 to 211275 11616

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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206,716 - 11614 mRNA_3246 0.73 0.1
206,970 - 11614 mRNA_3246 0.88 -0.1
206,989 + 11614 mRNA_3246 0.89 0.5
207,159 - -1.2
207,285 - 2.4
207,317 + 0.9
207,327 - 0.1
207,356 + -0.1
207,427 - 2.0
207,605 - 2.4
207,618 - 0.1
207,634 + 0.7
207,730 + 0.7
207,734 + 0.7
207,865 - 11615 mRNA_3247 0.17 1.3
207,926 - 11615 mRNA_3247 0.20 -2.0
207,984 + 11615 mRNA_3247 0.24 -1.2
208,012 + 11615 mRNA_3247 0.26 1.8
208,307 + 11615 mRNA_3247 0.43 2.4
208,320 + 11615 mRNA_3247 0.44 -1.0
208,328 + 11615 mRNA_3247 0.45 1.5
208,356 + 11615 mRNA_3247 0.46 -0.3
208,471 + 11615 mRNA_3247 0.53 1.6
208,489 + 11615 mRNA_3247 0.54 0.1
208,490 + 11615 mRNA_3247 0.54 -0.3
208,599 - 11615 mRNA_3247 0.61 0.1
208,609 + 11615 mRNA_3247 0.62 0.6
208,770 + 11615 mRNA_3247 0.71 0.6
208,773 - 11615 mRNA_3247 0.71 -1.0
208,930 + 11615 mRNA_3247 0.81 1.9
208,973 - 11615 mRNA_3247 0.83 -0.2
209,234 + 0.8
209,383 - -1.1
209,590 - 0.1
209,591 + 0.4
209,646 - -0.8
209,760 + 3.0
209,764 - 2.1
209,766 - 1.0
209,772 - -1.7
209,806 + -0.6
209,829 - -0.6
209,894 + 1.8
209,916 + -1.8
210,021 + 1.3
210,028 - 0.8
210,028 - -0.5
210,176 - -2.7