Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3246

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3246: 11614 - Hypothetical Protein, at 205429 to 207188 11614 mRNA_3247: 11615 - Hypothetical Protein, at 207586 to 209247 11615

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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204,437 - -0.4
204,443 - 2.0
204,445 + 2.6
204,447 - -3.0
204,448 + 1.6
204,448 - 0.2
204,454 + 0.2
204,454 + 0.6
204,455 - -0.1
204,463 + -0.0
204,468 - -0.3
204,473 + 1.0
204,479 + 3.2
204,484 - 2.0
204,491 - 0.6
204,511 - 0.1
204,528 - -0.4
204,534 - 0.0
204,547 - 0.5
204,557 + 2.3
204,639 + 0.9
204,647 + -2.2
204,652 - 0.6
204,654 + -0.7
204,664 - -0.0
204,665 + 2.0
204,678 + 0.4
204,695 + -0.1
204,699 + 0.3
204,724 - -1.6
204,727 + 0.7
204,801 - -0.2
204,811 + 1.7
204,826 + 1.3
204,957 - -0.1
205,112 + 0.2
205,123 + 0.5
205,258 + 0.4
205,351 + -1.1
205,379 - -1.7
205,534 + -0.8
205,548 - 0.1
205,821 + 11614 mRNA_3246 0.22 0.1
205,842 - 11614 mRNA_3246 0.23 1.5
205,853 + 11614 mRNA_3246 0.24 0.4
206,075 + 11614 mRNA_3246 0.37 0.5
206,250 - 11614 mRNA_3246 0.47 -1.9
206,282 + 11614 mRNA_3246 0.48 1.2
206,716 - 11614 mRNA_3246 0.73 0.1
206,970 - 11614 mRNA_3246 0.88 -0.1
206,989 + 11614 mRNA_3246 0.89 0.5
207,159 - -1.2
207,285 - 2.4
207,317 + 0.9
207,327 - 0.1
207,356 + -0.1
207,427 - 2.0
207,605 - 2.4
207,618 - 0.1
207,634 + 0.7
207,730 + 0.7
207,734 + 0.7
207,865 - 11615 mRNA_3247 0.17 1.3
207,926 - 11615 mRNA_3247 0.20 -2.0
207,984 + 11615 mRNA_3247 0.24 -1.2
208,012 + 11615 mRNA_3247 0.26 1.8