Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3241

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3240: 11608 - Hypothetical Protein, at 191163 to 192030 11608 mRNA_3241: 11609 - SUPERFAMILY--SSF52047, at 192497 to 194768 11609 mRNA_3242: 11610 - K01814 hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, at 194883 to 196226 11610

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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191,674 + 11608 mRNA_3240 0.59 1.0
191,677 + 11608 mRNA_3240 0.59 0.7
191,714 + 11608 mRNA_3240 0.63 1.6
191,861 + 11608 mRNA_3240 0.80 0.6
192,038 + 0.5
192,263 + -0.1
192,318 - 0.4
192,446 - 0.5
192,455 - 3.3
192,472 + 1.3
192,723 + -0.2
192,903 - 11609 mRNA_3241 0.18 1.5
193,455 + 11609 mRNA_3241 0.42 0.9
193,504 - 11609 mRNA_3241 0.44 0.2
193,581 - 11609 mRNA_3241 0.48 0.3
193,772 - 11609 mRNA_3241 0.56 -1.1
193,777 - 11609 mRNA_3241 0.56 -1.0
193,808 + 11609 mRNA_3241 0.58 -0.4
193,933 - 11609 mRNA_3241 0.63 1.9
193,955 + 11609 mRNA_3241 0.64 0.0
193,957 - 11609 mRNA_3241 0.64 -0.1
193,961 + 11609 mRNA_3241 0.64 -0.8
194,211 + 11609 mRNA_3241 0.75 -0.1
194,459 + 11609 mRNA_3241 0.86 0.7
194,509 - 11609 mRNA_3241 0.89 2.6