Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3240

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3240: 11608 - Hypothetical Protein, at 191163 to 192030 11608 mRNA_3241: 11609 - SUPERFAMILY--SSF52047, at 192497 to 194768 11609

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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190,236 - -0.3
190,244 + -0.1
190,248 - 0.2
190,265 + 1.1
190,433 - 0.5
190,548 - 0.1
190,596 + 0.2
190,980 - 0.6
190,995 - 0.9
191,020 - -0.2
191,105 + -1.0
191,107 + 1.0
191,426 - 11608 mRNA_3240 0.30 -0.4
191,465 - 11608 mRNA_3240 0.35 1.1
191,674 + 11608 mRNA_3240 0.59 1.0
191,677 + 11608 mRNA_3240 0.59 0.7
191,714 + 11608 mRNA_3240 0.63 1.6
191,861 + 11608 mRNA_3240 0.80 0.6
192,038 + 0.5
192,263 + -0.1
192,318 - 0.4
192,446 - 0.5
192,455 - 3.3
192,472 + 1.3
192,723 + -0.2
192,903 - 11609 mRNA_3241 0.18 1.5