Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3218

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3218: 11586 - PRINTS-Proline rich extensin signature-PR01217, at 118796 to 120170 11586

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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117,804 - -0.1
118,254 - 2.3
118,273 - 1.0
118,278 - 0.6
118,298 + 1.0
118,299 - 2.2
118,438 + -1.1
118,443 + -1.3
118,448 + -0.8
118,450 + -0.1
118,453 + -0.0
118,584 + 1.1
118,630 - -2.1
118,637 + 1.1
118,796 + 1.1
118,815 - 0.5
118,829 - -0.1
118,848 - 0.8
118,856 - 0.5
118,857 - -1.5
118,863 - -0.6
118,871 + -0.1
118,888 + 0.5
118,890 + 2.2
118,891 - -0.7
118,914 + -0.0
118,925 + -0.5
118,926 - -0.2
118,926 - 0.6
118,930 - 0.6
118,935 - 11586 mRNA_3218 0.10 0.5
118,936 + 11586 mRNA_3218 0.10 1.2
118,936 - 11586 mRNA_3218 0.10 0.0
118,943 - 11586 mRNA_3218 0.11 0.2
118,959 + 11586 mRNA_3218 0.12 0.8
119,003 + 11586 mRNA_3218 0.15 0.7
119,080 - 11586 mRNA_3218 0.21 -0.3
119,109 - 11586 mRNA_3218 0.23 1.6
119,407 - 11586 mRNA_3218 0.44 -0.1
119,449 - 11586 mRNA_3218 0.47 -0.3
119,459 + 11586 mRNA_3218 0.48 -0.5
119,478 - 11586 mRNA_3218 0.50 1.1
119,556 - 11586 mRNA_3218 0.55 0.9
119,558 - 11586 mRNA_3218 0.55 0.6
119,572 + 11586 mRNA_3218 0.56 3.3
119,575 - 11586 mRNA_3218 0.57 0.4
119,599 - 11586 mRNA_3218 0.58 2.4
119,718 - 11586 mRNA_3218 0.67 -1.1
119,756 + 11586 mRNA_3218 0.70 -0.1
119,922 - 11586 mRNA_3218 0.82 1.7
120,048 - 1.3
120,145 - 1.1
120,232 - 0.6
120,921 - -1.0