Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3130

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3130: 11498 - KOG2109 WD40 repeat protein, at 387441 to 391334 11498 mRNA_3131: 11499 - KOG1230 Protein containing repeated kelch motifs, at 391641 to 394728 11499

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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386,534 + 0.3
386,545 - -0.2
386,549 - -0.5
386,566 - 0.4
386,713 - 0.8
386,731 + -0.0
386,845 - 1.4
386,855 - 1.2
387,131 + 0.4
387,132 - 0.2
387,132 - 0.7
387,145 + 0.3
387,148 + 2.7
387,152 - 1.8
387,154 + -0.2
387,154 + -0.9
387,159 + -1.1
387,161 + 1.3
387,168 + 0.8
387,173 + 0.9
387,292 - -1.2
387,300 + 1.7
387,307 + 1.2
387,308 - 0.1
387,312 - -0.0
387,313 + 3.7
387,332 + 0.4
387,333 + 0.4
387,464 - 0.7
387,465 - 0.3
387,472 + 0.8
387,489 + 0.1
387,515 + -0.8
387,607 + -0.4
387,608 - -0.4
387,617 - -0.1
387,633 + 2.4
387,894 - 11498 mRNA_3130 0.12 0.3
387,899 + 11498 mRNA_3130 0.12 -0.1
387,899 + 11498 mRNA_3130 0.12 0.7
388,068 + 11498 mRNA_3130 0.16 -0.6
388,225 - 11498 mRNA_3130 0.20 2.0
388,343 - 11498 mRNA_3130 0.23 1.7
388,364 - 11498 mRNA_3130 0.24 -2.1
388,371 + 11498 mRNA_3130 0.24 -1.1
388,444 - 11498 mRNA_3130 0.26 0.5
388,463 + 11498 mRNA_3130 0.26 1.5
388,471 - 11498 mRNA_3130 0.26 1.0
388,752 + 11498 mRNA_3130 0.34 0.0
388,914 + 11498 mRNA_3130 0.38 1.3
389,076 - 11498 mRNA_3130 0.42 -1.5
389,124 - 11498 mRNA_3130 0.43 1.2
389,222 - 11498 mRNA_3130 0.46 -0.2
389,392 + 11498 mRNA_3130 0.50 2.0
389,397 - 11498 mRNA_3130 0.50 -0.1
389,510 + 11498 mRNA_3130 0.53 -0.2
389,779 - 11498 mRNA_3130 0.60 0.3
389,834 + 11498 mRNA_3130 0.61 -0.4
389,985 + 11498 mRNA_3130 0.65 2.0
390,138 + 11498 mRNA_3130 0.69 -0.3
390,270 - 11498 mRNA_3130 0.73 -0.2
390,376 + 11498 mRNA_3130 0.75 0.8
390,417 + 11498 mRNA_3130 0.76 1.5
390,538 + 11498 mRNA_3130 0.80 2.5
390,549 - 11498 mRNA_3130 0.80 0.7
390,703 - 11498 mRNA_3130 0.84 1.3
390,706 + 11498 mRNA_3130 0.84 0.6
390,719 + 11498 mRNA_3130 0.84 2.1
390,721 + 11498 mRNA_3130 0.84 1.9
390,854 - 11498 mRNA_3130 0.88 1.1
390,896 - 11498 mRNA_3130 0.89 1.6
391,116 - -0.2
391,132 + 1.4
391,152 - -0.4
391,305 + -0.0
391,309 + 1.1
391,424 - 0.6
391,585 + 0.9
391,588 + 0.4
391,622 - 2.4
392,104 - 11499 mRNA_3131 0.15 -1.0
392,295 - 11499 mRNA_3131 0.21 1.0
392,303 + 11499 mRNA_3131 0.21 0.6
392,319 - 11499 mRNA_3131 0.22 -2.5
392,331 - 11499 mRNA_3131 0.22 1.6