Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3071

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3071: 11439 - Hypothetical Protein, at 245578 to 247225 11439 mRNA_3072: 11440 - KOG1203 Predicted dehydrogenase, at 248202 to 249247 11440

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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244,721 - -0.3
244,732 - -0.2
244,839 - 0.3
244,865 + 1.8
244,987 + 0.1
245,018 + 0.5
245,171 - 0.8
245,277 - -2.0
245,292 + 0.6
245,331 - 4.8
245,460 + 0.0
245,873 + 11439 mRNA_3071 0.18 -0.1
246,163 + 11439 mRNA_3071 0.35 -0.5
246,296 - 11439 mRNA_3071 0.44 2.4
246,359 - 11439 mRNA_3071 0.47 2.4
246,440 - 11439 mRNA_3071 0.52 2.3
246,462 - 11439 mRNA_3071 0.54 0.3
246,473 + 11439 mRNA_3071 0.54 -0.6
246,568 + 11439 mRNA_3071 0.60 -0.0
246,578 - 11439 mRNA_3071 0.61 0.9
246,579 - 11439 mRNA_3071 0.61 0.0
246,584 + 11439 mRNA_3071 0.61 0.5
246,584 + 11439 mRNA_3071 0.61 -0.0
246,584 + 11439 mRNA_3071 0.61 2.6
246,584 + 11439 mRNA_3071 0.61 -1.0
246,584 + 11439 mRNA_3071 0.61 2.8
246,584 + 11439 mRNA_3071 0.61 -0.2
246,584 + 11439 mRNA_3071 0.61 0.6
246,620 + 11439 mRNA_3071 0.63 -0.4
246,657 + 11439 mRNA_3071 0.65 -0.8
246,696 - 11439 mRNA_3071 0.68 2.0
246,753 - 11439 mRNA_3071 0.71 -0.2
246,753 + 11439 mRNA_3071 0.71 0.7
246,828 + 11439 mRNA_3071 0.76 1.1
246,865 + 11439 mRNA_3071 0.78 0.9
246,934 - 11439 mRNA_3071 0.82 -0.1
247,161 + 0.8
247,284 + -1.3
247,294 - -0.6
247,297 + -4.3
247,311 - 0.5
247,313 - 0.4
247,314 + 1.5
247,444 - 3.0
247,467 - 0.0
247,589 - -0.3
247,597 - 0.3
247,599 + 0.5
247,603 - -1.6
247,605 + -0.5
247,615 + 0.1
247,617 - -0.4
247,618 - -1.2
247,620 + -1.9
247,623 + 0.5
247,625 - -0.4
247,745 + 0.8
247,757 + 0.6
247,765 - 0.6
247,771 + -1.0
247,868 + -0.1
247,908 - 2.3
247,917 - 0.6
247,922 + 0.2
248,052 - -0.8
248,054 - -0.1
248,064 + 0.1
248,077 - 0.6