Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3064

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3063: 11431 - Hypothetical Protein, at 227293 to 229777 11431 mRNA_3064: 11432 - K17617 CTDNEP1, DULLARD, NEM1 CTD nuclear envelope phosphatase 1, at 229860 to 230752 11432 mRNA_3065: 11433 - Hypothetical Protein, at 230805 to 232101 11433

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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228,961 + 11431 mRNA_3063 0.67 0.1
228,978 - 11431 mRNA_3063 0.68 1.6
229,109 - 11431 mRNA_3063 0.73 -0.3
229,135 + 11431 mRNA_3063 0.74 0.0
229,428 + 11431 mRNA_3063 0.86 0.5
229,618 + -2.9
229,737 + 0.0
229,737 + 0.2
229,829 - 2.4
229,909 - 0.9
229,958 + 11432 mRNA_3064 0.11 0.3
229,985 - 11432 mRNA_3064 0.14 -0.4
229,999 - 11432 mRNA_3064 0.16 -1.3
230,450 + 11432 mRNA_3064 0.66 0.0
230,730 - 3.0
230,789 - 1.9
230,883 + -0.1
230,892 + 0.6
231,040 - 11433 mRNA_3065 0.18 0.3
231,169 - 11433 mRNA_3065 0.28 0.2
231,324 + 11433 mRNA_3065 0.40 -0.7
231,459 - 11433 mRNA_3065 0.50 0.8
231,461 - 11433 mRNA_3065 0.51 2.1
231,465 - 11433 mRNA_3065 0.51 0.4
231,467 + 11433 mRNA_3065 0.51 1.1
231,468 + 11433 mRNA_3065 0.51 0.1
231,489 + 11433 mRNA_3065 0.53 0.7
231,592 + 11433 mRNA_3065 0.61 -0.8
231,632 + 11433 mRNA_3065 0.64 2.7
231,752 + 11433 mRNA_3065 0.73 0.0