Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3059

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3059: 11427 - Hypothetical Protein, at 217589 to 219191 11427 mRNA_3060: 11428 - K13115 CCDC130 coiled-coil domain-containing protein 130, at 219691 to 221317 11428

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
216,674 + 0.3
216,742 + -0.1
216,837 - -2.0
216,865 - -0.1
216,868 - -0.2
216,879 + 0.1
216,882 + -0.4
216,884 - -0.6
217,004 + -0.9
217,009 - 0.5
217,011 - 0.3
217,029 - 1.4
217,032 + 0.7
217,035 - 0.9
217,037 + 0.5
217,038 + 0.5
217,045 - -0.7
217,152 - 1.0
217,173 + -2.0
217,193 + -0.3
217,252 - 0.3
217,317 + -0.8
217,461 - -0.0
217,464 + 1.2
217,470 - 1.5
217,470 - 0.1
217,475 + -0.4
217,636 + 1.8
217,909 + 11427 mRNA_3059 0.20 -0.8
217,927 - 11427 mRNA_3059 0.21 0.4
218,062 + 11427 mRNA_3059 0.30 -0.5
218,066 + 11427 mRNA_3059 0.30 -0.9
218,147 - 11427 mRNA_3059 0.35 3.4
218,168 + 11427 mRNA_3059 0.36 1.3
218,203 - 11427 mRNA_3059 0.38 -2.1
218,447 - 11427 mRNA_3059 0.54 0.0
218,618 + 11427 mRNA_3059 0.64 -1.6
218,635 - 11427 mRNA_3059 0.65 1.4
218,649 + 11427 mRNA_3059 0.66 1.3
218,747 + 11427 mRNA_3059 0.72 -2.3
218,798 - 11427 mRNA_3059 0.75 0.1
218,892 - 11427 mRNA_3059 0.81 0.6
218,996 + 11427 mRNA_3059 0.88 0.8
219,037 + -0.3
219,182 - -0.3
219,183 - 0.5
219,309 - 0.1
219,330 - 1.3
219,331 - -0.0
219,346 - -2.0
219,346 - 1.2
219,347 + 1.0
219,451 - -0.9
219,453 + -0.9
219,467 - 2.4
219,484 - 0.4
219,501 - 0.8
219,513 + 0.2
219,624 - 3.0
219,630 + 0.4
219,630 + 1.2
219,637 + -1.4
219,639 + -1.1
219,753 - -0.2
219,759 - -0.8
219,763 + -0.0
219,765 - -1.3
219,768 - -0.0
219,773 + 0.5
219,780 - -1.7
219,902 - 11428 mRNA_3060 0.13 1.0
219,902 - 11428 mRNA_3060 0.13 -1.0
219,903 + 11428 mRNA_3060 0.13 1.0
219,908 + 11428 mRNA_3060 0.13 0.9
219,931 + 11428 mRNA_3060 0.15 0.0
220,038 - 11428 mRNA_3060 0.21 -0.3
220,082 + 11428 mRNA_3060 0.24 1.1