Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3044

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3044: 11412 - K11771 SWI1, ADR6 SWI/SNF chromatin-remodeling complex subunit SWI1, at 177701 to 181469 11412

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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176,758 + 0.4
176,899 - -0.4
176,910 + 1.3
176,932 + 0.4
176,938 - -0.8
177,075 - -0.0
177,089 + 0.4
177,250 + 0.0
177,395 + -0.8
177,417 + -0.6
177,542 + 0.3
177,663 + 1.2
177,818 - 0.0
177,941 + 0.9
178,014 - 0.6
178,939 + 11412 mRNA_3044 0.33 2.8
179,084 - 11412 mRNA_3044 0.37 -0.7
179,272 - 11412 mRNA_3044 0.42 1.1
179,552 - 11412 mRNA_3044 0.49 1.0
179,563 - 11412 mRNA_3044 0.49 1.3
179,570 + 11412 mRNA_3044 0.50 0.8
179,701 - 11412 mRNA_3044 0.53 0.7
179,808 + 11412 mRNA_3044 0.56 -0.4
180,261 + 11412 mRNA_3044 0.68 3.1
180,464 + 11412 mRNA_3044 0.73 -0.8
181,025 - 11412 mRNA_3044 0.88 -1.0
181,237 + 0.5
181,468 + 1.9
181,547 + 1.1
181,961 - 0.4
182,153 - 0.8
182,254 + 1.6