Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3034

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3034: 11402 - K05767 IQGAP2_3 Ras GTPase-activating-like protein IQGAP2/3, at 148393 to 151658 11402 mRNA_3035: 11403 - K03661 ATPeV0B, ATP6F V-type H+-transporting ATPase 21kDa proteolipid subunit, at 151976 to 152968 11403

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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147,413 - 2.6
147,524 - -0.5
147,799 + 0.0
147,977 + 1.7
147,990 - 1.1
148,016 + -1.8
148,026 + 0.4
148,031 + 0.3
148,040 + -0.1
148,065 + 0.5
148,093 - 0.5
148,118 - -0.6
148,122 - 2.2
148,132 - 0.3
148,142 + 0.8
148,142 + 0.8
148,299 - 2.3
148,301 - 0.4
148,422 + 0.4
148,428 + -0.8
148,453 + -0.1
148,582 - 1.1
148,700 + 1.2
148,727 + 11402 mRNA_3034 0.10 -1.4
148,832 - 11402 mRNA_3034 0.13 0.4
148,992 + 11402 mRNA_3034 0.18 1.3
149,009 - 11402 mRNA_3034 0.19 0.6
149,018 - 11402 mRNA_3034 0.19 0.8
149,027 + 11402 mRNA_3034 0.19 -0.4
149,191 - 11402 mRNA_3034 0.24 -0.7
150,187 - 11402 mRNA_3034 0.55 -2.4
150,340 + 11402 mRNA_3034 0.60 -0.8
150,346 + 11402 mRNA_3034 0.60 -0.8
150,889 - 11402 mRNA_3034 0.76 2.1
151,009 + 11402 mRNA_3034 0.80 0.0
151,253 - 11402 mRNA_3034 0.88 -3.1
151,604 - 1.9
151,652 - 0.9
151,769 + 0.9
151,874 + 0.2