Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2991

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2990: 11358 - SUPERFAMILY--SSF52047, at 21801 to 25370 11358 mRNA_2991: 11359 - SUPERFAMILY--SSF50685, at 25748 to 27268 11359 mRNA_2992: 11360 - Hypothetical Protein, at 27862 to 28502 11360

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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25,089 + 1.0
25,386 - 0.4
25,389 - -1.5
25,415 - 0.7
25,430 + -2.1
25,430 + -0.1
25,547 - -0.8
25,560 - -0.6
25,564 - -0.0
25,565 + -1.3
25,569 - 1.9
25,582 + 1.8
25,587 - -2.0
25,588 + 0.2
25,889 - 1.9
26,023 + 11359 mRNA_2991 0.18 0.2
26,023 + 11359 mRNA_2991 0.18 -0.8
26,148 - 11359 mRNA_2991 0.26 0.2
26,279 - 11359 mRNA_2991 0.35 -0.7
26,297 + 11359 mRNA_2991 0.36 4.1
26,415 - 11359 mRNA_2991 0.44 -0.2
26,631 + 11359 mRNA_2991 0.58 -0.3
26,899 + 11359 mRNA_2991 0.76 -1.4
26,941 - 11359 mRNA_2991 0.78 2.0
27,032 + 11359 mRNA_2991 0.84 0.5
27,036 + 11359 mRNA_2991 0.85 0.3
27,163 + -0.7
27,297 - -0.6
27,305 - -0.1
27,327 + -0.0
27,453 + 1.6
27,474 + 0.5
27,485 + -1.3
27,500 + 1.5
27,622 - -0.3
27,774 + 1.1
27,796 + -1.5