Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2985

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2984: 11352 - HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427, at 11630 to 12169 11352 mRNA_2985: 11353 - KOG1203 Predicted dehydrogenase, at 12654 to 13709 11353 mRNA_2986: 11354 - K19176 FAAH2 fatty acid amide hydrolase 2, at 14214 to 16255 11354

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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11,734 + 11352 mRNA_2984 0.19 0.3
11,751 + 11352 mRNA_2984 0.22 0.8
11,936 + 11352 mRNA_2984 0.57 -0.5
11,936 + 11352 mRNA_2984 0.57 1.7
12,002 - 11352 mRNA_2984 0.69 0.7
12,011 + 11352 mRNA_2984 0.71 0.5
12,011 + 11352 mRNA_2984 0.71 1.3
12,042 - 11352 mRNA_2984 0.76 2.4
12,156 + 1.6
12,174 + -0.1
12,177 - -1.0
12,481 + 3.5
12,767 + 11353 mRNA_2985 0.11 1.2
12,773 - 11353 mRNA_2985 0.11 0.5
12,800 + 11353 mRNA_2985 0.14 0.2
12,938 + 11353 mRNA_2985 0.27 1.2
13,160 - 11353 mRNA_2985 0.48 0.7
13,477 + 11353 mRNA_2985 0.78 2.4
13,546 + 11353 mRNA_2985 0.84 1.7
13,885 + 1.6
13,907 - -0.4
13,934 - -1.5
14,076 - -0.5
14,077 - -0.1
14,226 - 1.0
14,237 + 0.5
14,237 + 0.7
14,266 - -0.7
14,358 + 0.5
14,425 - 11354 mRNA_2986 0.10 2.0
14,538 + 11354 mRNA_2986 0.16 1.9
14,547 + 11354 mRNA_2986 0.16 2.3
14,547 + 11354 mRNA_2986 0.16 1.2
14,680 + 11354 mRNA_2986 0.23 0.3
14,706 + 11354 mRNA_2986 0.24 2.1