Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2983

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2982: 11350 - Hypothetical Protein, at 7297 to 8646 11350 mRNA_2983: 11351 - K00993 EPT1 ethanolaminephosphotransferase, at 8891 to 11294 11351 mRNA_2984: 11352 - HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427, at 11630 to 12169 11352

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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7,931 + 11350 mRNA_2982 0.47 0.4
8,208 - 11350 mRNA_2982 0.67 -0.5
8,233 - 11350 mRNA_2982 0.69 1.3
8,236 - 11350 mRNA_2982 0.70 -3.3
8,397 - 11350 mRNA_2982 0.81 1.0
8,399 + 11350 mRNA_2982 0.82 0.3
8,400 + 11350 mRNA_2982 0.82 1.2
8,450 + 11350 mRNA_2982 0.85 2.6
8,489 + 11350 mRNA_2982 0.88 -1.4
8,510 + 11350 mRNA_2982 0.90 -0.3
8,622 + -0.1
8,669 + 0.2
8,737 + 0.7
8,803 - 0.2
8,815 + 0.4
9,041 - -1.4
9,260 - 11351 mRNA_2983 0.15 1.2
9,277 + 11351 mRNA_2983 0.16 0.9
9,279 - 11351 mRNA_2983 0.16 0.5
9,296 - 11351 mRNA_2983 0.17 -0.8
9,357 + 11351 mRNA_2983 0.19 -1.0
9,383 + 11351 mRNA_2983 0.20 0.5
9,414 + 11351 mRNA_2983 0.22 -0.1
9,476 - 11351 mRNA_2983 0.24 -0.3
9,646 + 11351 mRNA_2983 0.31 -1.6
9,689 - 11351 mRNA_2983 0.33 1.4
9,697 + 11351 mRNA_2983 0.34 -0.9
9,878 - 11351 mRNA_2983 0.41 -0.1
10,123 - 11351 mRNA_2983 0.51 -0.1
10,266 - 11351 mRNA_2983 0.57 0.3
10,274 + 11351 mRNA_2983 0.58 1.3
10,559 + 11351 mRNA_2983 0.69 0.1
10,572 - 11351 mRNA_2983 0.70 0.5
10,575 - 11351 mRNA_2983 0.70 0.6
10,579 + 11351 mRNA_2983 0.70 -0.8
10,616 + 11351 mRNA_2983 0.72 0.4
10,855 + 11351 mRNA_2983 0.82 1.1
10,900 + 11351 mRNA_2983 0.84 0.6
10,903 - 11351 mRNA_2983 0.84 -1.3
11,013 - 11351 mRNA_2983 0.88 0.2
11,029 - 11351 mRNA_2983 0.89 1.8
11,036 + 11351 mRNA_2983 0.89 -1.4
11,135 + -0.1
11,292 - 0.9
11,307 + -0.3
11,366 + -1.0
11,438 - 0.2
11,450 + -0.3
11,450 + 0.6
11,572 + -0.2
11,581 + 0.2
11,581 + -1.5
11,582 - 0.8
11,598 - 1.7
11,602 - 0.9
11,734 + 11352 mRNA_2984 0.19 0.3
11,751 + 11352 mRNA_2984 0.22 0.8
11,936 + 11352 mRNA_2984 0.57 -0.5
11,936 + 11352 mRNA_2984 0.57 1.7
12,002 - 11352 mRNA_2984 0.69 0.7
12,011 + 11352 mRNA_2984 0.71 0.5
12,011 + 11352 mRNA_2984 0.71 1.3
12,042 - 11352 mRNA_2984 0.76 2.4
12,156 + 1.6
12,174 + -0.1
12,177 - -1.0