Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2981

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2981: 11349 - SUPERFAMILY--SSF50685, at 3491 to 5123 11349

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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2,531 + 0.2
2,553 - -0.3
2,558 + 0.9
2,560 + -1.6
2,562 + 0.5
2,571 + 0.3
2,575 + 1.9
2,579 - -0.0
2,623 + -0.2
2,624 - 0.1
2,668 + 0.3
2,972 + -1.3
3,025 - 1.7
3,111 + -0.8
3,116 + 2.0
3,172 + 0.6
3,447 + 0.4
3,456 + -0.3
3,567 + -0.8
3,590 - 1.3
3,592 - -0.4
3,845 + 11349 mRNA_2981 0.22 0.5
3,859 + 11349 mRNA_2981 0.23 0.2
3,865 - 11349 mRNA_2981 0.23 -0.6
4,065 + 11349 mRNA_2981 0.35 0.6
4,151 - 11349 mRNA_2981 0.40 1.4
4,152 - 11349 mRNA_2981 0.40 0.8
4,154 + 11349 mRNA_2981 0.41 -1.2
4,253 + 11349 mRNA_2981 0.47 1.2
4,259 + 11349 mRNA_2981 0.47 0.4
4,431 - 11349 mRNA_2981 0.58 -0.6
4,433 + 11349 mRNA_2981 0.58 0.9
4,561 + 11349 mRNA_2981 0.66 1.8
4,580 + 11349 mRNA_2981 0.67 1.5
4,641 - 11349 mRNA_2981 0.70 -1.2
4,748 - 11349 mRNA_2981 0.77 2.5
4,759 + 11349 mRNA_2981 0.78 0.2
4,839 - 11349 mRNA_2981 0.83 -0.4
4,914 - 11349 mRNA_2981 0.87 0.7
4,949 + 11349 mRNA_2981 0.89 3.7
5,099 - 1.2
5,103 + 0.9
5,196 - 0.3
5,295 - -0.0
5,499 + 1.0
5,743 + -0.0
5,793 + -1.0