Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2958

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2957: 11325 - Hypothetical Protein, at 645332 to 646636 11325 mRNA_2958: 11326 - K17907 ATG9 autophagy-related protein 9, at 647495 to 650461 11326

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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646,603 + 1.6
646,635 + -0.5
646,744 - -0.1
646,747 + -0.7
646,821 - -0.2
646,894 - 1.6
647,166 + 0.1
647,168 - -0.3
647,213 + -0.1
647,321 - -1.0
647,607 - 0.4
647,612 - -1.8
647,612 - 1.9
647,612 - 1.2
647,612 - -2.3
647,624 - 0.5
647,635 - -0.5
647,763 - 0.1
647,767 + -0.1
648,061 + 11326 mRNA_2958 0.19 -1.0
648,241 + 11326 mRNA_2958 0.25 0.1
648,369 - 11326 mRNA_2958 0.29 2.3
648,509 + 11326 mRNA_2958 0.34 0.7
648,754 - 11326 mRNA_2958 0.42 -1.1
649,221 + 11326 mRNA_2958 0.58 0.4
649,260 + 11326 mRNA_2958 0.59 0.8
649,369 + 11326 mRNA_2958 0.63 0.1
649,649 - 11326 mRNA_2958 0.73 -1.7
649,652 - 11326 mRNA_2958 0.73 0.1
650,273 + 0.9
650,377 - 0.5
650,566 + 0.7
650,688 - -0.4
651,118 + -0.4
651,134 - 0.6
651,142 + 0.2
651,289 + -0.7
651,299 + 0.3
651,386 + -0.9
651,447 + -0.9
651,450 - 0.3