Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2946

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2945: 11313 - K15175 CDC73 parafibromin, at 617308 to 618975 11313 mRNA_2946: 11314 - SUPERFAMILY--SSF56112, at 619500 to 621824 11314 mRNA_2947: 11315 - Hypothetical Protein, at 622694 to 625091 11315

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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619,104 - 0.1
619,360 + 0.8
619,363 - 0.1
619,499 - 0.1
619,513 - 1.0
619,525 - -0.5
619,937 + 11314 mRNA_2946 0.19 0.9
619,937 - 11314 mRNA_2946 0.19 -0.3
619,958 + 11314 mRNA_2946 0.20 0.6
620,080 + 11314 mRNA_2946 0.25 -0.7
620,083 - 11314 mRNA_2946 0.25 0.4
620,259 + 11314 mRNA_2946 0.33 1.5
620,513 - 11314 mRNA_2946 0.44 0.2
620,536 + 11314 mRNA_2946 0.45 0.9
620,573 + 11314 mRNA_2946 0.46 1.1
620,573 + 11314 mRNA_2946 0.46 0.2
620,573 + 11314 mRNA_2946 0.46 1.9
620,724 + 11314 mRNA_2946 0.53 -0.0
620,764 - 11314 mRNA_2946 0.54 2.7
620,869 + 11314 mRNA_2946 0.59 2.9
620,983 + 11314 mRNA_2946 0.64 -0.2
621,264 + 11314 mRNA_2946 0.76 -0.4
621,380 - 11314 mRNA_2946 0.81 2.7
621,399 - 11314 mRNA_2946 0.82 -1.1
621,409 + 11314 mRNA_2946 0.82 1.4
621,520 - 11314 mRNA_2946 0.87 -1.2
621,685 - -1.6
621,703 + 0.3
621,735 - 0.2
621,804 + 0.3
621,821 + 1.1
621,965 - 0.5
621,992 - -0.6
622,016 + 0.6
622,134 + -0.4
622,134 + 0.3
622,463 + -0.2
622,720 - 0.6