Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2927

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2926: 11294 - Hypothetical Protein, at 572041 to 573157 11294 mRNA_2927: 11295 - K07955 ARL8 ADP-ribosylation factor-like protein 8, at 573302 to 574331 11295 mRNA_2928: 11296 - Hypothetical Protein, at 574492 to 576496 11296

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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572,436 + 11294 mRNA_2926 0.35 -0.7
572,444 - 11294 mRNA_2926 0.36 0.2
572,570 + 11294 mRNA_2926 0.47 3.2
572,581 - 11294 mRNA_2926 0.48 0.7
572,865 - 11294 mRNA_2926 0.74 0.4
572,876 + 11294 mRNA_2926 0.75 0.1
572,884 + 11294 mRNA_2926 0.75 -0.9
572,952 + 11294 mRNA_2926 0.82 1.0
572,957 - 11294 mRNA_2926 0.82 -0.1
573,184 + 0.7
573,193 - 1.1
573,198 + 0.9
573,364 + -0.7
573,366 - -0.5
573,451 + 11295 mRNA_2927 0.14 -0.6
573,458 + 11295 mRNA_2927 0.15 -0.1
573,460 + 11295 mRNA_2927 0.15 2.1
573,660 - 11295 mRNA_2927 0.35 -0.3
574,183 + 11295 mRNA_2927 0.86 -0.8
574,194 + 11295 mRNA_2927 0.87 -0.5
574,314 - -1.2
574,318 - 3.5
574,328 + -0.2
574,460 + 1.4
574,460 - -0.7
574,584 - -0.9
574,620 - -1.6
574,633 - 0.9
574,637 + 0.2
574,644 - -0.2
574,648 - -0.8
574,776 - 11296 mRNA_2928 0.14 -0.8
574,808 - 11296 mRNA_2928 0.16 1.8
574,898 - 11296 mRNA_2928 0.20 1.8
575,021 - 11296 mRNA_2928 0.26 -0.7
575,062 - 11296 mRNA_2928 0.28 -1.5
575,064 - 11296 mRNA_2928 0.29 1.2
575,194 - 11296 mRNA_2928 0.35 2.7
575,199 + 11296 mRNA_2928 0.35 0.1