Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2899

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2898: 11266 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 483006 to 488500 11266 mRNA_2899: 11267 - K15276 SLC35B2, PAPST1 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2, at 488938 to 492084 11267

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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487,989 - -2.2
488,154 + 1.4
488,224 - 0.4
488,235 - -0.6
488,262 + -1.5
488,372 - 1.3
488,389 + 0.4
488,506 - -0.3
488,521 + -0.4
488,534 + -0.5
488,556 + 0.2
488,650 - 0.3
488,712 - 0.7
488,719 + -0.4
488,766 + 1.0
488,806 + 0.9
488,807 - -0.4
488,935 - 1.4
488,937 + -1.4
488,969 - 1.3
488,970 + 0.4
488,997 + 2.3
489,000 + 0.8
489,038 - 0.8
489,553 + 11267 mRNA_2899 0.20 -0.5
489,675 + 11267 mRNA_2899 0.23 1.7
489,773 + 11267 mRNA_2899 0.27 1.5
489,878 - 11267 mRNA_2899 0.30 4.3
489,970 - 11267 mRNA_2899 0.33 0.1
489,988 - 11267 mRNA_2899 0.33 -1.5
490,005 - 11267 mRNA_2899 0.34 -0.9
490,995 - 11267 mRNA_2899 0.65 3.1
491,034 + 11267 mRNA_2899 0.67 0.1
491,116 + 11267 mRNA_2899 0.69 -1.1
491,250 + 11267 mRNA_2899 0.73 1.4
491,363 - 11267 mRNA_2899 0.77 0.6
491,396 - 11267 mRNA_2899 0.78 0.3
491,402 + 11267 mRNA_2899 0.78 -1.5
491,825 - 0.2
492,271 + -1.7
492,515 - 1.7
492,597 + -0.6
492,607 + 0.1
492,686 - -0.1
492,716 - 0.4
492,778 + -0.3
492,872 - 0.8
492,889 + -0.3