Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2897

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2896: 11264 - KOG3043 Predicted hydrolase related to dienelactone hydrolase, at 478182 to 479265 11264 mRNA_2897: 11265 - K12613 DCP2 mRNA-decapping enzyme subunit 2, at 479604 to 482899 11265 mRNA_2898: 11266 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 483006 to 488500 11266

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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478,659 + 11264 mRNA_2896 0.44 -0.2
479,515 + 0.1
479,520 - -1.4
479,541 - 3.3
479,550 + 1.0
481,964 - 11265 mRNA_2897 0.72 0.9
481,993 - 11265 mRNA_2897 0.72 0.5
482,083 - 11265 mRNA_2897 0.75 1.1
482,400 + 11265 mRNA_2897 0.85 2.3
482,553 + 11265 mRNA_2897 0.89 -0.1
482,737 + -0.6
482,761 + -0.6
483,214 + -1.3
483,340 + 0.1
483,425 + 0.3
483,430 - 0.1
483,566 - 11266 mRNA_2898 0.10 0.9
483,572 + 11266 mRNA_2898 0.10 1.5
483,583 - 11266 mRNA_2898 0.11 -0.5
483,706 + 11266 mRNA_2898 0.13 -1.9