Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2859

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2858: 11226 - HMMPfam-Translocon-associated protein (TRAP), alpha subunit-PF03896, at 383912 to 385065 11226 mRNA_2859: 11227 - Hypothetical Protein, at 385402 to 386720 11227 mRNA_2860: 11228 - K11811 arsH arsenical resistance protein ArsH, at 387053 to 388029 11228

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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384,599 - 11226 mRNA_2858 0.60 -0.5
384,709 - 11226 mRNA_2858 0.69 -1.2
384,754 + 11226 mRNA_2858 0.73 0.1
385,032 + -0.2
385,286 - 0.0
385,300 + 0.8
385,755 + 11227 mRNA_2859 0.27 -0.4
386,041 + 11227 mRNA_2859 0.48 1.7
386,198 + 11227 mRNA_2859 0.60 0.4
386,476 - 11227 mRNA_2859 0.81 1.9
386,606 + 0.8
386,710 - 0.6
386,731 + -0.5
386,760 - 0.3
386,761 - -0.5
386,766 + -0.6
386,768 - 2.2
386,771 - 0.1
386,775 - 2.7
386,776 + -0.5
386,791 - 0.4
386,793 + -1.3
386,793 + -0.2
386,794 + -1.1
386,795 - 0.2
386,815 + 0.7
386,816 + -1.1
386,834 + 0.6
386,846 + 1.4
386,850 + -1.6
386,861 + 0.9
386,875 + 2.7
386,975 + 0.3
386,992 - 0.4
387,132 + -0.6
387,436 + 11228 mRNA_2860 0.39 0.3