Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2836

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2835: 11203 - K00022 HADH 3-hydroxyacyl-CoA dehydrogenase, at 326503 to 328205 11203 mRNA_2836: 11204 - HMMPfam-Putative zinc finger motif, C2HC5-type-PF06221, at 328530 to 330386 11204 mRNA_2837: 11205 - KOG4100 Uncharacterized conserved protein, at 330565 to 331429 11205

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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327,760 + 11203 mRNA_2835 0.74 1.9
328,040 - -0.1
328,046 + 0.2
328,210 - 0.3
328,334 - -1.4
328,352 + 2.3
328,355 + 1.6
328,396 + 1.3
328,432 - 0.8
328,477 - -0.8
328,519 + 0.5
328,772 - 11204 mRNA_2836 0.13 0.1
328,898 - 11204 mRNA_2836 0.20 1.0
328,911 + 11204 mRNA_2836 0.21 -0.2
328,926 - 11204 mRNA_2836 0.21 0.0
329,068 + 11204 mRNA_2836 0.29 0.3
329,322 - 11204 mRNA_2836 0.43 0.6
329,472 + 11204 mRNA_2836 0.51 0.8
329,821 + 11204 mRNA_2836 0.70 2.1
330,525 + 1.6
330,675 - 11205 mRNA_2837 0.13 0.5
330,684 - 11205 mRNA_2837 0.14 1.0
330,813 - 11205 mRNA_2837 0.29 2.1
330,974 - 11205 mRNA_2837 0.47 0.2