Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2797

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2796: 11164 - K08286 E2.7.11.- protein-serine/threonine kinase, at 236700 to 240335 11164 mRNA_2797: 11165 - HMMPfam-CBP4-PF07960, at 240577 to 240997 11165 mRNA_2798: 11166 - K03537 POP5 ribonuclease P/MRP protein subunit POP5, at 241326 to 242097 11166

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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240,048 - 2.6
240,172 + -0.9
240,245 + -0.2
240,377 + 3.1
240,518 - 0.9
240,527 + -0.4
240,657 - 11165 mRNA_2797 0.19 -1.2
240,664 + 11165 mRNA_2797 0.21 0.3
240,794 - 11165 mRNA_2797 0.52 2.6
240,820 - 11165 mRNA_2797 0.58 0.1
240,840 + 11165 mRNA_2797 0.62 1.1
240,956 - 0.7
241,121 - 2.1
241,268 - 1.2