Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2786

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2785: 11153 - ProSiteProfiles-CRIB domain profile.-PS50108, at 208531 to 209463 11153 mRNA_2786: 11154 - Hypothetical Protein, at 209744 to 210942 11154 mRNA_2787: 11155 - KOG1848 Uncharacterized conserved protein, at 211081 to 216177 11155

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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208,790 + 11153 mRNA_2785 0.28 0.4
209,219 - 11153 mRNA_2785 0.74 0.2
209,278 + 11153 mRNA_2785 0.80 -1.2
209,374 - 0.9
210,026 - 11154 mRNA_2786 0.24 0.2
210,107 + 11154 mRNA_2786 0.30 -0.6
210,397 - 11154 mRNA_2786 0.54 -0.6
210,407 + 11154 mRNA_2786 0.55 -1.2
210,431 + 11154 mRNA_2786 0.57 1.2
210,567 - 11154 mRNA_2786 0.69 -1.2
210,637 - 11154 mRNA_2786 0.74 1.5
210,675 - 11154 mRNA_2786 0.78 0.9
210,683 + 11154 mRNA_2786 0.78 0.6
210,697 + 11154 mRNA_2786 0.79 0.6
210,827 + -0.9
210,830 - -0.4
210,844 + 0.8
210,948 - -0.7
210,991 + 1.4
211,000 + 0.5
211,119 + -0.9
211,251 + 1.1
211,275 + 0.8
211,376 - 0.4
211,584 + 0.2
211,728 + 11155 mRNA_2787 0.13 -0.7
211,730 - 11155 mRNA_2787 0.13 0.0
211,766 + 11155 mRNA_2787 0.13 -2.4
211,876 + 11155 mRNA_2787 0.16 -0.1
211,886 - 11155 mRNA_2787 0.16 -0.0