Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2784

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2784: 11152 - K20241 WDR44, RAB11BP WD repeat-containing protein 44, at 204617 to 208124 11152 mRNA_2785: 11153 - ProSiteProfiles-CRIB domain profile.-PS50108, at 208531 to 209463 11153

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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203,844 - 0.7
204,222 + -0.5
204,264 + -0.2
204,519 - 0.2
204,522 - -0.8
204,561 + 0.6
205,247 - 11152 mRNA_2784 0.18 1.3
205,302 + 11152 mRNA_2784 0.20 0.5
205,381 + 11152 mRNA_2784 0.22 2.3
205,713 + 11152 mRNA_2784 0.31 1.1
205,717 - 11152 mRNA_2784 0.31 0.6
205,721 + 11152 mRNA_2784 0.31 0.4
205,884 + 11152 mRNA_2784 0.36 1.7
205,976 - 11152 mRNA_2784 0.39 2.8
206,154 + 11152 mRNA_2784 0.44 0.8
206,179 - 11152 mRNA_2784 0.45 0.3
206,187 - 11152 mRNA_2784 0.45 1.0
206,595 + 11152 mRNA_2784 0.56 1.3
207,151 + 11152 mRNA_2784 0.72 0.2
207,613 - 11152 mRNA_2784 0.85 1.1
207,771 - 11152 mRNA_2784 0.90 0.5
207,773 - 11152 mRNA_2784 0.90 0.5
207,780 + -0.0
207,884 - -0.1
208,021 - 1.3
208,066 + 1.9
208,508 - -1.3
208,602 - 0.4
208,656 - 11153 mRNA_2785 0.13 -0.6
208,662 + 11153 mRNA_2785 0.14 3.6
208,691 - 11153 mRNA_2785 0.17 0.6
208,790 + 11153 mRNA_2785 0.28 0.4