Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2780

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2780: 11148 - KOG0546 HSP90 co-chaperone CPR7/Cyclophilin, at 194102 to 194966 11148 mRNA_2781: 11149 - K09506 DNAJA5 DnaJ homolog subfamily A member 5, at 195140 to 197521 11149

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
193,120 + 0.3
193,253 + -0.9
193,285 - 3.4
193,308 + 0.1
193,309 - -0.2
193,310 - 0.2
193,318 + -0.5
193,321 - 0.4
193,330 + 1.6
193,383 - 0.8
193,384 + -0.4
193,391 + -0.9
193,397 - 0.2
193,397 - 1.0
193,404 + 0.2
193,414 - 1.4
193,435 - -0.6
193,462 - 0.4
193,478 - 1.6
193,480 - -2.0
193,489 - -1.8
193,522 - 0.0
193,529 + 0.4
193,543 + -0.1
193,563 + 2.0
193,573 - 1.4
193,578 + 0.2
193,578 + 1.1
193,582 + 0.4
193,600 + 0.0
193,615 - 2.8
193,621 + 2.0
193,622 + 0.8
193,623 + 1.2
193,703 + 1.6
193,745 + 0.8
193,749 + 0.2
193,875 - 0.6
193,900 + 1.5
194,369 - 11148 mRNA_2780 0.31 0.7
194,482 - 11148 mRNA_2780 0.44 -0.3
194,582 - 11148 mRNA_2780 0.55 -0.6
194,599 + 11148 mRNA_2780 0.57 0.7
194,602 - 11148 mRNA_2780 0.58 0.3
194,770 - 11148 mRNA_2780 0.77 -0.7
194,880 + -0.7
194,919 - -0.3
194,924 - -0.7
194,925 + 0.5
194,926 + -0.9
195,071 + 0.3
195,200 - -0.8
195,228 + -0.6
195,345 + 0.2
195,661 - 11149 mRNA_2781 0.22 0.3
195,759 - 11149 mRNA_2781 0.26 -1.8
195,810 + 11149 mRNA_2781 0.28 1.7
195,852 - 11149 mRNA_2781 0.30 -2.0
195,891 + 11149 mRNA_2781 0.32 1.5