Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2778

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2778: 11146 - K15264 NSUN5, WBSCR20 putative methyltransferase, at 188984 to 191295 11146 mRNA_2779: 11147 - K18278 THI5 pyrimidine precursor biosynthesis enzyme, at 191425 to 193018 11147

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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188,093 + 0.8
188,523 + 0.4
188,527 + 0.6
188,528 - -0.2
188,649 + 1.0
188,797 + 1.2
188,809 + 1.0
188,975 + 0.8
189,217 - 11146 mRNA_2778 0.10 -1.1
189,420 + 11146 mRNA_2778 0.19 2.2
189,437 - 11146 mRNA_2778 0.20 2.1
189,551 + 11146 mRNA_2778 0.25 -0.3
189,786 + 11146 mRNA_2778 0.35 -2.6
189,843 - 11146 mRNA_2778 0.37 1.0
189,974 - 11146 mRNA_2778 0.43 -0.4
189,997 + 11146 mRNA_2778 0.44 -0.4
190,735 + 11146 mRNA_2778 0.76 -1.1
190,941 - 11146 mRNA_2778 0.85 -0.2
190,942 + 11146 mRNA_2778 0.85 -0.8
190,964 - 11146 mRNA_2778 0.86 0.1
190,970 + 11146 mRNA_2778 0.86 0.4
191,153 - -2.2
191,153 + 1.0
191,161 + 0.0
191,319 + 0.4
191,320 - -0.1
191,348 - -0.2
191,430 - -0.1
191,441 - 0.8
191,552 + 0.2
191,580 - -1.4
191,763 + 11147 mRNA_2779 0.21 2.3
191,794 + 11147 mRNA_2779 0.23 0.5
192,023 - 11147 mRNA_2779 0.38 -3.3
192,129 + 11147 mRNA_2779 0.44 0.8