Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2730

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2729: 11097 - KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily), at 90358 to 92251 11097 mRNA_2730: 11098 - Hypothetical Protein, at 92250 to 93018 11098 mRNA_2731: 11099 - HMMPfam-Domain of unknown function (DUF4112)-PF13430, at 93029 to 93911 11099

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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92,091 - 1.1
92,205 + 0.6
92,383 - 11098 mRNA_2730 0.17 0.7
92,385 - 11098 mRNA_2730 0.18 1.7
92,402 + 11098 mRNA_2730 0.20 1.2
92,504 + 11098 mRNA_2730 0.33 0.1
92,524 - 11098 mRNA_2730 0.36 0.8
92,661 - 11098 mRNA_2730 0.53 0.2
92,671 - 11098 mRNA_2730 0.55 -0.2
92,672 - 11098 mRNA_2730 0.55 -1.1
92,674 + 11098 mRNA_2730 0.55 -0.2
92,675 - 11098 mRNA_2730 0.55 1.1
92,687 - 11098 mRNA_2730 0.57 0.3
92,691 - 11098 mRNA_2730 0.57 0.2
92,691 - 11098 mRNA_2730 0.57 0.8
92,695 + 11098 mRNA_2730 0.58 0.0
92,695 + 11098 mRNA_2730 0.58 0.2
92,697 + 11098 mRNA_2730 0.58 -0.2
92,697 + 11098 mRNA_2730 0.58 -1.4
92,706 + 11098 mRNA_2730 0.59 1.1
92,709 - 11098 mRNA_2730 0.60 0.9
92,712 - 11098 mRNA_2730 0.60 -0.4
92,715 + 11098 mRNA_2730 0.60 1.5
92,715 + 11098 mRNA_2730 0.60 2.7
92,716 - 11098 mRNA_2730 0.61 0.3
92,716 + 11098 mRNA_2730 0.61 2.4
92,716 + 11098 mRNA_2730 0.61 0.4
92,716 - 11098 mRNA_2730 0.61 0.2
92,727 + 11098 mRNA_2730 0.62 1.0
92,731 - 11098 mRNA_2730 0.63 2.0
92,732 + 11098 mRNA_2730 0.63 0.5
92,733 + 11098 mRNA_2730 0.63 0.3
92,785 - 11098 mRNA_2730 0.70 1.0
92,826 - 11098 mRNA_2730 0.75 1.5
92,834 - 11098 mRNA_2730 0.76 0.3
92,841 + 11098 mRNA_2730 0.77 -0.5
92,843 - 11098 mRNA_2730 0.77 2.0
92,862 + 11098 mRNA_2730 0.80 1.2
92,961 + -1.4
92,980 - -0.2
92,983 - 0.8
93,115 - 1.6