Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2714

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2714: 11082 - KOG2477 Uncharacterized conserved protein, at 63364 to 66371 11082 mRNA_2715: 11083 - Hypothetical Protein, at 66913 to 70114 11083

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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62,378 + -0.9
62,383 - 2.5
62,389 + 2.0
62,390 - -0.5
62,396 - 0.7
62,398 - -0.8
62,399 - 0.7
62,406 + 1.3
62,407 + 0.5
62,410 + 0.1
62,413 + -1.7
62,416 + -0.2
62,422 + 2.2
62,427 + -0.3
62,428 - 0.6
62,432 + 0.6
62,505 - 0.8
62,512 - 0.3
62,515 - 1.1
62,533 + -0.4
62,536 - -0.5
62,546 + -0.5
62,557 + -0.7
62,564 - -0.1
62,565 + 0.1
62,567 - -0.1
62,696 + 0.1
62,699 + -0.2
62,709 + -0.1
62,710 - 0.2
62,711 - 1.4
62,724 + -0.2
62,726 - -0.2
62,731 + 0.7
62,741 + 1.1
62,743 - 0.7
62,752 - -0.9
62,786 - -0.0
62,790 - -2.3
62,790 - -1.6
62,792 - 0.2
62,796 + 0.6
62,807 - 2.0
62,815 - 1.3
62,819 + 0.0
62,831 + -0.2
62,843 + 1.1
62,882 - 1.2
62,882 + 0.8
62,897 - 0.3
62,899 + 0.4
62,919 - 0.5
62,919 + -0.7
62,920 + -0.4
62,922 + 1.7
62,930 - 0.9
62,930 + 0.4
62,934 + -0.4
62,935 + 2.8
63,003 + -0.3
63,109 - 0.5
63,124 - 0.3
63,124 + -0.1
63,137 + 0.1
63,223 - -0.5
63,283 - 0.8
64,443 - 11082 mRNA_2714 0.36 -0.1
64,445 - 11082 mRNA_2714 0.36 1.1
64,768 - 11082 mRNA_2714 0.47 0.9
64,801 + 11082 mRNA_2714 0.48 0.6
64,921 - 11082 mRNA_2714 0.52 1.8
65,158 - 11082 mRNA_2714 0.60 1.8
65,192 - 11082 mRNA_2714 0.61 0.3
65,256 + 11082 mRNA_2714 0.63 0.9
66,052 - 11082 mRNA_2714 0.89 -1.6
66,444 - -0.0
66,497 - 0.1
66,531 - -0.8
66,643 + 0.5
66,788 - 0.3
66,919 - -0.2
66,979 + -0.1
66,981 - 0.2