Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2713

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2712: 11080 - KOG4648 Uncharacterized conserved protein, contains LRR repeats, at 58923 to 60414 11080 mRNA_2713: 11081 - BLAST Clp1-like protein, putative [Rhizoctonia solani AG-3 ..., at 60604 to 61559 11081

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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59,650 - 11080 mRNA_2712 0.49 0.8
59,772 - 11080 mRNA_2712 0.57 1.3
60,232 - 11080 mRNA_2712 0.88 0.4
60,480 - -1.3
60,723 + 11081 mRNA_2713 0.12 0.9
61,348 - 11081 mRNA_2713 0.78 0.9
61,497 - 0.9
61,647 - 0.9
61,779 - 1.7
61,811 + 0.1
61,828 + 2.5
61,835 + 1.1
61,884 - -0.7
61,899 - -0.4
61,928 + 0.2
61,942 + 0.6
61,969 - -0.8
61,978 - -0.8
62,019 + 2.3
62,039 - 1.6
62,043 - 0.3
62,045 + 0.2
62,049 - 0.0
62,075 + 0.2
62,078 - -2.0
62,189 + 0.4
62,245 - -0.1
62,247 - 1.2
62,277 + -2.0
62,278 + -1.6
62,283 + 3.0
62,342 + 0.1
62,355 - -0.0
62,378 + -0.9
62,383 - 2.5
62,389 + 2.0
62,390 - -0.5
62,396 - 0.7
62,398 - -0.8
62,399 - 0.7
62,406 + 1.3
62,407 + 0.5
62,410 + 0.1
62,413 + -1.7
62,416 + -0.2
62,422 + 2.2
62,427 + -0.3
62,428 - 0.6
62,432 + 0.6
62,505 - 0.8
62,512 - 0.3
62,515 - 1.1
62,533 + -0.4
62,536 - -0.5
62,546 + -0.5
62,557 + -0.7