Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2693

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2692: 11060 - K06656 PCL1 G1/S-specific cyclin PLC1, at 16619 to 17964 11060 mRNA_2693: 11061 - K18470 ARHGAP1, CDC42GAP Rho GTPase-activating protein 1, at 18614 to 20530 11061 mRNA_2694: 11062 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF54695, at 20926 to 22511 11062

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
17,714 + 11060 mRNA_2692 0.81 1.7
17,984 + -1.2
18,124 + -1.7
18,236 - -0.4
18,439 - 3.4
18,682 - -2.2
18,871 - 11061 mRNA_2693 0.13 1.4
18,995 - 11061 mRNA_2693 0.20 0.3
19,012 - 11061 mRNA_2693 0.21 -0.2
19,013 + 11061 mRNA_2693 0.21 1.8
19,155 - 11061 mRNA_2693 0.28 -0.1
19,163 + 11061 mRNA_2693 0.29 0.1
19,173 + 11061 mRNA_2693 0.29 1.4
19,463 + 11061 mRNA_2693 0.44 -1.7
19,616 + 11061 mRNA_2693 0.52 -0.2
19,874 + 11061 mRNA_2693 0.66 0.4
19,876 - 11061 mRNA_2693 0.66 -0.6
19,876 - 11061 mRNA_2693 0.66 1.3
19,899 - 11061 mRNA_2693 0.67 -0.0
19,901 + 11061 mRNA_2693 0.67 -0.1
19,903 + 11061 mRNA_2693 0.67 -0.2
19,907 - 11061 mRNA_2693 0.67 0.0
20,002 + 11061 mRNA_2693 0.72 -1.1
20,007 + 11061 mRNA_2693 0.73 1.6
20,031 - 11061 mRNA_2693 0.74 -0.6
20,074 + 11061 mRNA_2693 0.76 0.3
20,079 + 11061 mRNA_2693 0.76 0.0
20,123 + 11061 mRNA_2693 0.79 0.9
20,310 - 11061 mRNA_2693 0.88 -0.3
20,466 - 0.9
20,610 - 1.0
20,614 - 0.6
20,616 - 0.7
20,617 - -0.5
20,628 + 2.2
20,664 + -0.2
20,707 + 3.3
20,724 + -1.1
20,765 - 1.0
20,784 - -0.1
20,792 - 2.2
20,922 - 0.8
20,923 + 1.7
20,930 + -0.7
20,935 + -2.0
20,959 - 0.3
20,959 - 0.8
20,960 - -1.1
20,960 - 2.9
20,966 + 2.0
20,972 - -0.8
20,979 + 0.6
21,305 - 11062 mRNA_2694 0.24 -0.7
21,312 + 11062 mRNA_2694 0.24 0.7
21,358 + 11062 mRNA_2694 0.27 0.1
21,372 - 11062 mRNA_2694 0.28 0.8